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Título

New evidence of cryptic speciation in the family Longidoridae (Nematoda: Dorylaimida)

AutorCai, Ruihang; Archidona-Yuste, Antonio CSIC ORCID CVN; Cantalapiedra-Navarrete, C. CSIC; Palomares Rius, Juan E. CSIC ORCID; Castillo, Pablo CSIC ORCID
Palabras claveBayesian inference
Cytochrome oxidase c subunit 1 (coxI)
Expansion domains of the large ribosomal subunit (28S)
Integrative taxonomy
Plant-parasitic nematodes
Fecha de publicación12-abr-2020
EditorZenodo
CitaciónCai, Ruihang; Archidona-Yuste, Antonio; Cantalapiedra-Navarrete, C.; Palomares Rius, Juan E.; Castillo, Pablo; 2020; New evidence of cryptic speciation in the family Longidoridae (Nematoda: Dorylaimida) [Dataset]; Zenodo; Version 1; https://doi.org/10.5281/zenodo.3749246
ResumenLongidorid nematodes comprise more than 500 species, and Longidorus and Xiphinema are the most diversified, abundant and cosmopolitan genera, which increases the risk of species misidentification. We conducted an integrative morphometric and genetic study on two longidorid species to elucidate the existence of new cases of cryptic speciation within the genera Longidorus and Xiphinema. Detailed morphological, morphometric, multivariate and genetic studies were carried out, as well as mitochondrial and nuclear haploweb analyses, to differentiate species within the L. iliturgiensis- and X. hispanum-complexes. Species delimitation using haplonet tools of L. iliturgiensis-species complex clearly separated L. tabernensis sp. nov. from L. iliturgiensis and L. indalus. Similarly, the haploweb analysis of X. subbaetense sp. nov. showed it as a unique and separate species from X. hispanum and X. adenohystherum. D2-D3 expansion domains of 28S rRNA, partial 18S rRNA, and partial coxI region were used for inferring phylogenetic relationships. The present study provides new insights into the diversity of Longidorus and Xiphinema species detected in southern Spain, and new evidence of cryptic speciation in both genera. These results support our hypothesis that the biodiversity of Longidoridae in southern Europe is higher than previously supposed and is still not fully clarified.
Versión del editorhttps://doi.org/10.5281/zenodo.3749246
URIhttp://hdl.handle.net/10261/286281
DOIhttps://doi.org/10.20350/digitalCSIC/15080
ISMN10.5281/zenodo.3749246
ReferenciasCai, Ruihang; Archidona-Yuste, Antonio; Cantalapiedra-Navarrete, C.; Palomares Rius, Juan E.; Castillo, Pablo. New evidence of cryptic speciation in the family Longidoridae (Nematoda: Dorylaimida). Journal of Zoological Systematics and Evolutionary Research 58(4): 869-899 (2020). http://doi.org/10.1111/jzs.12393 . http://hdl.handle.net/10261/227973
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Fichero Descripción Tamaño Formato
18S_TREE_L_tabernensis sp. nov3,53 kBUnknownVisualizar/Abrir
18S_TREE_X_subbaetense sp. nov2,35 kBUnknownVisualizar/Abrir
28S_TREE_L_tabernensis sp. nov3,52 kBUnknownVisualizar/Abrir
28S_TREE_X_subbaetense sp. nov3,86 kBUnknownVisualizar/Abrir
COXI_TREE_L_tabernensis sp. nov3,9 kBUnknownVisualizar/Abrir
COXI_TREE_X_subbaetense sp. nov2,85 kBUnknownVisualizar/Abrir
DATA_1_28S_Ltabernensis.fas89,69 kBUnknownVisualizar/Abrir
DATA_1a_28S_Ltabernensis.fasta167,62 kBUnknownVisualizar/Abrir
DATA_1b_28S_Ltabernensis.fas89,69 kBUnknownVisualizar/Abrir
DATA_2_28S_Xsubbaetense.fas79,37 kBUnknownVisualizar/Abrir
DATA_2a_28S_Xsubbaetense.fasta118,71 kBUnknownVisualizar/Abrir
DATA_2b_28S_Xsubbaetense.fas79,37 kBUnknownVisualizar/Abrir
DATA_3_18S_Ltabernensis.fas146,68 kBUnknownVisualizar/Abrir
DATA_3a_18S_Ltabernensis.fasta216,96 kBUnknownVisualizar/Abrir
DATA_3b_18S_Ltabernensis.fas146,68 kBUnknownVisualizar/Abrir
DATA_4a_18S_Xsubbaetense.fasta117,8 kBUnknownVisualizar/Abrir
DATA_4b_18S_Xsubbaetense.fas104,55 kBUnknownVisualizar/Abrir
DATA_5_coxI_Ltaberensis.fas35,13 kBUnknownVisualizar/Abrir
DATA_5a_coxI_Ltaberensis.fasta51,58 kBUnknownVisualizar/Abrir
DATA_5b_coxI_Ltaberensis.fas35,13 kBUnknownVisualizar/Abrir
DATA_6_coxI_Xsubbaetense.fas30,42 kBUnknownVisualizar/Abrir
DATA_6a_coxI_Xsubbaetense.fasta39,63 kBUnknownVisualizar/Abrir
DATA_6b_coxI_Xsubbaetense.fas30,42 kBUnknownVisualizar/Abrir
SCRIPT PHYLOGENETIC TREES LONGIDORUS TABERNENSIS SP. NOV. AND XIPHINEMA SUBBAETENSE SP. NOV. CAI ET AL. 2020 JZS.txt3,42 kBTextVisualizar/Abrir
README.txt3,06 kBTextVisualizar/Abrir
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