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Título: | Additional file 1 of On the holobiont ‘predictome’ of immunocompetence in pigs |
Autor: | Calle-García, Joan; Ramayo-Caldas, Yuliaxis; Zingaretti, Laura M. CSIC ORCID; Quintanilla, Raquel; Ballester, María CSIC ORCID; Pérez-Enciso, Miguel CSIC ORCID | Palabras clave: | Use one source Uniformly best across Still largely unexplored Microbial clustering strategies Including immune response Gut bacterial communities e ., concentration Different modelling strategies Clustering microbial abundances 70 k snps 400 duroc pigs Used phenotypic data Host genomic information Clustering microbial data Six immunity traits Predicting immunocompetence traits Microbiota data Innate immunity Numerous traits Complex traits Wide catalogue Variance explained Results overall Relative abundance Reactive protein Predictive capacity Predictive accuracy Natural step Microbiome data Host genotype Greater variability Ensemble method |
Fecha de publicación: | 2-may-2023 | Editor: | Figshare | Citación: | Calle-García, Joan; Ramayo-Caldas, Yuliaxis; Zingaretti, Laura M.; Quintanilla, Raquel; Ballester, María; Pérez-Enciso, Miguel; 2023; Additional file 1 of On the holobiont ‘predictome’ of immunocompetence in pigs [Dataset]; Figshare; Version 1; https://doi.org/10.6084/m9.figshare.22729267.v1 | Resumen: | Additional file 1: QIIME2 pipeline used to process and combine the two 16S sequence datasets. | Versión del editor: | https://doi.org/10.6084/m9.figshare.22729267.v1 | URI: | http://hdl.handle.net/10261/335659 | DOI: | 10.6084/m9.figshare.22729267.v1 | Referencias: | Calle-García, Joan; Ramayo-Caldas, Yuliaxis; Zingaretti, Laura M.; Quintanilla, Raquel; Ballester, María; Pérez-Enciso, Miguel. On the holobiont 'predictome' of immunocompetence in pigs. https://doi.org/10.1186/s12711-023-00803-4. http://hdl.handle.net/10261/335588 |
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12711_2023_803_MOESM1_ESM.sh | Bash Shell Script File | 8,38 kB | Bash Shell Script File | Visualizar/Abrir |
README.txt | 3,26 kB | Text | Visualizar/Abrir |
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