Code for: Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses

Salguero-Linares, José Manuel; Serrano, Irene; Ruiz-Solani, Nerea; Salas-Gómez, Marta; Phukan, Ujjal J.; González, Víctor M.; Bernardo-Faura, Martí; Valls, Marc; Rengel, David; Coll, Núria S.

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Título:	Code for: Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
Autor:	Salguero-Linares, José Manuel CSIC ORCID; Serrano, Irene; Ruiz-Solani, Nerea CSIC ORCID; Salas-Gómez, Marta CSIC; Phukan, Ujjal J. CSIC ORCID; González, Víctor M. CSIC ORCID; Bernardo-Faura, Martí CSIC ORCID; Valls, Marc CSIC ORCID; Rengel, David; Coll, Núria S. CSIC ORCID
Palabras clave:	Arabidopsis thaliana Cell Death Indicator Effector-triggered Immunity Hypersensitive Response
Fecha de publicación:	14-mar-2022
Editor:	CORA-RDR
Citación:	Salguero-Linares, José Manuel; Serrano, Irene; Ruiz-Solani, Nerea; Salas-Gómez, Marta; Phukan, Ujjal J.; González, Víctor M.; Bernardo-Faura, Martí; Valls, Marc; Rengel, David; Coll, Núria S. ; 2022; Code for: Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses [Dataset]; CORA.Repositori de Dades de Recerca; versión 1; https://doi.org/10.34810/data174
Resumen:	Code and analysis results for "Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses. The repository contains code folders for RNASeq analysis and Figure preparation as well as data folders for GO, annotation, qPCR and microscopy data and others.
Descripción:	This dataset compiles the code for the research article "Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses". Both the raw and processed transcriptomic data experimentally generated and analysed here in order to identify transcriptional indicators of plant immune cell death are available at GEO (currently under embargo). In addition, supplementary data published with the article, some of which was generated using this code, is available (currently under embargo until manuscript publication) in a linked dataset (https://doi.org/10.34810/data136). Code mainly created by Víctor González and José Salguero Linares. Additional code and analysis suport by David Rengel and Martí Bernardo-Faura.
Versión del editor:	https://doi.org/10.34810/data174
URI:	http://hdl.handle.net/10261/308699
DOI:	10.34810/data174
Referencias:	Salguero-Linares, José Manuel; Serrano, Irene; Ruiz-Solani, Nerea; Salas-Gómez, Marta; Phukan, Ujjal J.; González, Víctor M.; Bernardo-Faura, Martí; Valls, Marc; Rengel, David; Coll, Núria S.Robust transcriptional indicators of immune cell death revealed by spatiotemporal transcriptome analyses. https://doi.org/10.1016/j.molp.2022.04.010. http://hdl.handle.net/10261/279802
Aparece en las colecciones:	(CRAG) Conjuntos de datos