Monitoring the complex benthic habitat on semi-dark underwater marine caves using photogrammetry-based 3D reconstructions

Abstract

Marine caves are dark environments considered a priority habitat for conservation included in the EU Habitats Directive (H8330). They harbor fragile benthic communities and represent a major reservoir of marine biodiversity. However, there is a lack of knowledge of these habitats due to the difficulties of creating detailed benthic maps and characterizing the biodiversity, structure, and dynamics of their communities. The uniqueness of marine caves fosters their popularity among recreational divers, who can cause disturbances through abrasion of the biota, resuspension of sediment, and accumulation of exhaled air bubbles in the caves' ceilings. This study aims to build a monitoring framework to characterize the structure and temporal dynamics of this complex habitat using Structurefrom- Motion (SfM) photogrammetry. SfM is a novel, non-invasive technique that allows a major advancement in the monitoring of changes in the cave’s community assemblages. This method relies on images acquired by 4K video footage to build fine-scaled 3D digital models of the substrate using overlapping imagery. For this study, we combined SfM photogrammetry and photo quadrats extracted from the video recordings. We evaluate the effectiveness of this methodology in a marine cave highly frequented by divers, located in Illa de l’Aire (Balearic Islands, Spain), and carried out two surveys before and after the diving season (2019-2021). As a result, we found a loss of 25 colonies of bryozoans with fragile skeletons, like Schizoretepora sp., and 8 individual sponges with globose morphotypes. Our results indicate that this methodology enables accurate and efficient monitoring of benthic communities in underwater caves that allow us to better understand their dynamics and, therefore, to develop the need management measures.