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openAccess18TV29 Mol Cell Proteomics-2018-Planas.pdf.jpg1-jun-2018Protease Activities Triggered by Ralstonia solanacearum Infection in Susceptible and Tolerant Tomato LinesPlanas-Marquès, Marc CSIC; Bernardo-Faura, Martí CSIC ORCID; Paulus, Judith; Kaschani, Farnusch; Kaiser, Markus; Valls, Marc CSIC ORCID; Hoorn, Renier A. L. van der; Coll, Núria S. CSIC ORCIDartículo
closedAccessaccesoRestringido.pdf.jpg2013Ralstonia solanacearum, a widespread bacterial plant pathogen in the post-genomic eraPeeters, Nemo; Guidot, Alice; Vailleau, Fabienne; Valls, Marc CSIC ORCIDartículo
openAccessrecrusymb.pdf.jpg2017Recruitment of a lineage-specific virulence regulatory pathway promotes intracellular infection by a plant pathogen experimentally evolved into a legume symbiontCapela, Delphine; Marchetti, Marta; Clérissi, Camille; Perrier, Anthony; Guetta, Dorian; Gris, Carine; Valls, Marc CSIC ORCID; Jauneau, Alain; Cruveiller, Stéphane; Rocha, Eduardo P. C.; Masson-Boivin, Catherineartículo
openAccessrepaythio.pdf.jpg2016RipAY, a plant pathogen effector protein, exhibits robust γ-glutamyl cyclotransferase activity when stimulated by eukaryotic thioredoxinsFujiwara, Shoko; Kawazoe, Tomoki; Kitagawa, Takao; Popa, Crina CSIC ORCID; Valls, Marc CSIC ORCID; Genin, Stephane; Nakamura, Kazuyuki; Tanaka, Naotaka; Tabuchi, Mitsuakiartículo
openAccess6-jun-2022Robust transcriptional indicators of immune cell death revealed by spatiotemporal transcriptome analysesSalguero-Linares, José Manuel CSIC ORCID; Serrano, Irene; Ruiz-Solani, Nerea CSIC ORCID; Salas-Gómez, Marta CSIC; Phukan, Ujjal J. CSIC ORCID; González, Víctor M. CSIC ORCID; Bernardo-Faura, Martí CSIC ORCID; Valls, Marc CSIC ORCID; Rengel, David; Coll, Núria S. CSIC ORCIDartículo
openAccess19-dic-2023S1 Dataset. DEGs in the two environmental conditions (Soil and Water) and in the three in planta conditions (Apoplast, Early xyem and Late xylem) compared to the reference rich B medium (phi)Pedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccessppat.1011888.s008.tiff.jpg19-dic-2023S1 Fig. Experimental set-up and differentially expressed genes (DEGs)Pedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccess19-dic-2023S1 Table. List of waters used in this workPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccessppat.1011888.s009.tif.jpg19-dic-2023S2 Fig. GO and KEGG enrichment analyses of the environmental conditionsPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccess19-dic-2023S2 Table. Chemical analysis of the natural soil used in the studyPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccessppat.1011888.s010.tiff.jpg19-dic-2023S3 Fig. Time-course expression of the PhrpB::Lux reporter in strains disrupted for the different T3SS regulatory genes after resuspension in waterPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccess19-dic-2023S3 Table. List of genes correspoding to the intersections shown in the UpsetR plots (Fig 1B and 1D)Pedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccessppat.1011888.s011.tiff.jpg19-dic-2023S4 Fig. Induction of the type 3 secretion system (T3SS) by basic pH in all natural water sources testedPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccess19-dic-2023S4 Table. TAG enrichment analysis summaryPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccessppat.1011888.s012.tiff.jpg19-dic-2023S5 Fig. Induction of nitrogen metabolism genes in soilPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccess19-dic-2023S5 Table. Output tables of the KEGG and GO enrichment analysis conducted on general and exclusive up- and downregulated DEGs from water and soil conditionsPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccessppat.1011888.s013.tiff.jpg19-dic-2023S6 Fig. Expression of all stress response and the type 3 secretion system (T3SS) and type 3 effector gene groupsPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccess19-dic-2023S6 Table. Bacterial strains, plasmids, and oligonucleotides used in this workPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccessppat.1011888.s014.tiff.jpg19-dic-2023S7 Fig. Expression of key genes associated with oxidative stress in soil and water at 3 dpiPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset
openAccessppat.1011888.s015.tiff.jpg19-dic-2023S8 Fig. Viability of R. solanacearum cells in soil microcosmsPedro-Jové, Roger de CSIC ORCID; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina CSIC ORCID; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S. CSIC ORCID; Orellano, Elena G.; Valls, Marc CSIC ORCIDdataset