Please use this identifier to cite or link to this item: http://hdl.handle.net/10261/47083
Share/Export:
logo share SHARE BASE
Visualizar otros formatos: MARC | Dublin Core | RDF | ORE | MODS | METS | DIDL | DATACITE

Invite to open peer review
Title

Merging on-demand HPC resources from Amazon EC2 with the grid: a case study of a Xmipp application

AuthorsLorca, Alejandro CSIC; Martín-Caro, Javier; Núñez-Ramírez, Rafael CSIC ; Martínez-Salazar, Javier CSIC ORCID
Issue DateJun-2011
PublisherNetbiblo
CitationIBERGRID: 85-96 (2011)
AbstractWe present an infrastructure in which HPC resources from the Amazon Web Services public cloud are combined with specific grid resources at Ibergrid. The integration is done transparently for the GridWay users through a daemon which permanently monitors the pool of available resources and submitted jobs, managing virtual instances for satisfying the demand under budget restrictions. The study has been proved with a specific application from the Xmipp package, which performs image processing from electron microscopy data and requires heavy high-throughput computing offering parallelization capabilities. The application was ported successfully for such a hybrid framework with the help of the MPI-Start package. Some preliminary results from test runs are presented for a controlled sample of thousand input images. Some inconveniences and troublesome aspects of the deployment are also reported.
Description12 páginas, 5 figuras, 4 tablas.-- Trabajo presentado al 5th Iberian Grid Infrastructure Conference celebrado en Santander (España) del 8 al 10 de junio de 2011.
Publisher version (URL)http://dx.doi.org/10.4272/978-84-9745-884-9
URIhttp://hdl.handle.net/10261/47083
DOI10.4272/978-84-9745-884-9
ISBN978-84-9745-884-9
Appears in Collections:(CFMAC-IEM) Libros y partes de libros
(SGAI) Libros y partes de libros
(IFCA) Libros y partes de libros




Files in This Item:
File Description SizeFormat
Páginas de fulltext.pdf524,92 kBAdobe PDFThumbnail
View/Open
Show full item record

CORE Recommender

Page view(s)

369
checked on Apr 16, 2024

Download(s)

214
checked on Apr 16, 2024

Google ScholarTM

Check

Altmetric

Altmetric


WARNING: Items in Digital.CSIC are protected by copyright, with all rights reserved, unless otherwise indicated.