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Title

Curated phage lysins collection including identifiers, amino acid sequences, functional domain predictions, architectures and physicochemical properties calculations

AuthorsVázquez, Roberto ; García, Ernesto ; García, Pedro
Issue DateOct-2020
CitationVázquez, Roberto; García, Ernesto; García, Pedro; 2020; "Curated phage lysins collection including identifiers, amino acid sequences, functional domain predictions, architectures and physicochemical properties calculations "; DIGITAL.CSIC; http://dx.doi.org/10.20350/digitalCSIC/12674
AbstractCollection of phage lysin sequences retrieved from previously published genomic data; collected, curated, analysed and provided as part of the work "Sequence-function relationships in phage-encoded bacterial cell wall lytic enzymes and their implications for phage-derived products design", published in XXXXX (202X).
DescriptionTwo comma-separated values (CSV) files named 'lysins_rf.csv' and 'lysins_pf.csv', the first one containing the full list of lysin entries (with GenBank/RefSeq sequence identifiers, amino acid sequences, bacterial hosts data, architectural information and sequence-based physicochemical calculations) and the second one comprising the domain sequence predictions performed on the aforementioned lysins according to PfamScan (https://www.ebi.ac.uk/Tools/pfa/pfamscan/)
URIhttp://hdl.handle.net/10261/221469
DOIhttp://dx.doi.org/10.20350/digitalCSIC/12674
ReferencesVázquez, Roberto; García, Ernesto; García, Pedro. Sequence-function relationships in phage-encoded bacterial cell wall lytic enzymes and their implications for phage-derived products design.
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lysins_pf.csv1,83 MBUnknownView/Open
readme_lysins_pf.txt2,51 kBTextView/Open
readme_lysins_rf.txt4,52 kBTextView/Open
lysins_rf.csv2,08 MBUnknownView/Open
readme.txt1,51 kBTextView/Open
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