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Hiding in Plain Sight: The Globally Distributed Bacterial Candidate Phylum PAUC34f

AuthorsChen, Michael L.; Becraft, Eric D.; Pachiadaki, Maria; Brown, Julia M.; Jarett, Jessica K.; Gasol, Josep M. ; Ravin, Nikolai V.; Moser, Duane P.; Nunoura, Takuro; Herndl, Gerhard J.; Woyke, Tanja; Stepanauskas, R.
KeywordsMicrobial ecology
Uncultivated bacteria
Microbial genomics
Dark ocean
Issue DateMar-2020
PublisherFrontiers Media
CitationFrontiers in Microbiology 11: 376 (2020)
AbstractBacterial candidate phylum PAUC34f was originally discovered in marine sponges and is widely considered to be composed of sponge symbionts. Here, we report 21 single amplified genomes (SAGs) of PAUC34f from a variety of environments, including the dark ocean, lake sediments, and a terrestrial aquifer. The diverse origins of the SAGs and the results of metagenome fragment recruitment suggest that some PAUC34f lineages represent relatively abundant, free-living cells in environments other than sponge microbiomes, including the deep ocean. Both phylogenetic and biogeographic patterns, as well as genome content analyses suggest that PAUC34f associations with hosts evolved independently multiple times, while free-living lineages of PAUC34f are distinct and relatively abundant in a wide range of environments
Description12 pages, 4 figures, 2 tables, supplementary material https://doi.org/10.3389/fmicb.2020.00376.-- All genome data is available in the Joint Genome Institute Integrated Microbial Genome database
Publisher version (URL)https://doi.org/10.3389/fmicb.2020.00376
Identifiersdoi: 10.3389/fmicb.2020.00376
e-issn: 1664-302X
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