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Title

Integration of Cryo-EM Model Building Software in Scipion.

AuthorsMartínez, Marta; Jiménez-Moreno, Amaya; Maluenda, David; Ramírez-Aportela, Erney CSIC ORCID; Melero, Roberto CSIC ORCID; Cuervo, Ana; Conesa Mingo, Pablo; Caño, Laura del; Fonseca-Reyna, Yunior C.; Sánchez-García, Rubén; Strelak, David; Conesa, Jose J.; Fernández-Giménez, Elena; Isidro, Federico de; Sorzano, Carlos Óscar S.; Marabini, Roberto
KeywordsElectron microscopy
Atomic model
Model building
Scipion
Software intergration
Issue Date2020
PublisherAmerican Chemical Society
CitationJournal of Chemical Information and Modeling (2020)
AbstractAdvances in cryo-electron microscopy (cryoEM have made possible to obtain structures of large biological macromolecules at near-atomic resolution. This "resolution-revolution'' has encouraged the use and development of modeling tools able to produce high-quality atomic models from cryoEM density maps. Unfortunately, many practical problems appear when combining different packages in the same processing workflow, which make difficult the use of these tools by non-experts and, therefore, reduce their utility. We present here a major extension of the image processing framework Scipion that provides inter-package integration in the model building area and full tracking of the complete workflow, from image processing to structure validation.
Publisher version (URL)http://dx.doi.org/10.1021/acs.jcim.9b01032
URIhttp://hdl.handle.net/10261/199685
DOI10.1021/acs.jcim.9b01032
ISSN1549-9596
E-ISSN1549-960X
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