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dc.contributor.authorAlberti, Adriana-
dc.contributor.authorFerrera, Isabel-
dc.contributor.authorAcinas, Silvia G.-
dc.contributor.authorRoyo-Llonch, Marta-
dc.contributor.authorCornejo-Castillo, Francisco M.-
dc.contributor.authorLogares, Ramiro-
dc.contributor.authorFernández-Gómez, Beatriz-
dc.contributor.authorWincker, Patrick-
dc.identifierdoi: 10.1038/sdata.2017.93-
dc.identifiere-issn: 2052-4463-
dc.identifier.citationScientific Data 4: 170093 (2017)-
dc.descriptionAlberti, Adriana ... et al.-- 20 pages, 6 figures, 2 tables-
dc.description.abstractA unique collection of oceanic samples was gathered by the Tara Oceans expeditions (2009–2013), targeting plankton organisms ranging from viruses to metazoans, and providing rich environmental context measurements. Thanks to recent advances in the field of genomics, extensive sequencing has been performed for a deep genomic analysis of this huge collection of samples. A strategy based on different approaches, such as metabarcoding, metagenomics, single-cell genomics and metatranscriptomics, has been chosen for analysis of size-fractionated plankton communities. Here, we provide detailed procedures applied for genomic data generation, from nucleic acids extraction to sequence production, and we describe registries of genomics datasets available at the European Nucleotide Archive (ENA, www.ebi.ac.uk/ena). The association of these metadata to the experimental procedures applied for their generation will help the scientific community to access these data and facilitate their analysis. This paper complements other efforts to provide a full description of experiments and open science resources generated from the Tara Oceans project, further extending their value for the study of the world’s planktonic ecosystems-
dc.description.sponsorshipWe thank the commitment of the following people and sponsors: CNRS (in particular Groupement de Recherche GDR3280), European Molecular Biology Laboratory (EMBL), Genoscope/CEA, the French Government 'Investissements d'Avenir' programmes OCEANOMICS (ANR-11-BTBR-0008) and FRANCE GENOMIQUE (ANR-10-INBS-09-08), Agence Nationale de la Recherche, European Union FP7 (MicroB3/No.287589) and the U.S. National Science Foundation awards DEB-1031049, OCE-0623288, OCE-821374 and OCE-1019242 (to M.E.S. and R.S.) and OCE-1335810 (to R.S.). Additional funding was provided by Spanish Ministry of Science and Innovation grant CGL2011-26848/BOS MicroOcean PANGENOMICS and by Japan Society for the Promotion of Science (JSPS)/KAKENHI (grant numbers 26430184, 16H06429, 16K21723 and 16H06437). We also thank the support and commitment of agnès b. and Etienne Bourgois, the Veolia Environment Foundation, Region Bretagne, Lorient Agglomeration, World Courier, Illumina, the Eléctricité de France (EDF) Foundation, Fondation pour la recherche sur la biodiversité (FRB), the Foundation Prince Albert II de Monaco, the Tara Foundation, its schooner and teams-
dc.publisherNature Publishing Group-
dc.relation.isversionofPublisher's version-
dc.titleViral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition-
dc.description.versionPeer Reviewed-
dc.contributor.funderRégion Bretagne-
dc.contributor.funderLorient Agglomération-
dc.contributor.funderWorld Courier-
dc.contributor.funderFondation EDF-
dc.contributor.funderFondation pour la Recherche sur la Biodiversité (France)-
dc.contributor.funderFondation Prince Albert II de Monaco-
dc.contributor.funderTara Foundation-
dc.contributor.funderVeolia Foundation-
dc.contributor.funderMinisterio de Ciencia e Innovación (España)-
dc.contributor.funderNational Science Foundation (US)-
dc.contributor.funderEuropean Commission-
dc.contributor.funderAgence Nationale de la Recherche (France)-
dc.contributor.funderEuropean Molecular Biology Laboratory-
dc.contributor.funderCentre National de la Recherche Scientifique (France)-
dc.contributor.funderJapan Society for the Promotion of Science-
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