Por favor, use este identificador para citar o enlazar a este item:
http://hdl.handle.net/10261/153511
COMPARTIR / EXPORTAR:
SHARE CORE BASE | |
Visualizar otros formatos: MARC | Dublin Core | RDF | ORE | MODS | METS | DIDL | DATACITE | |
Campo DC | Valor | Lengua/Idioma |
---|---|---|
dc.contributor.author | Andrés-León, Eduardo | es_ES |
dc.contributor.author | Núñez-Torres, Rocío | es_ES |
dc.contributor.author | Rojas Mendoza, Ana M. | es_ES |
dc.date.accessioned | 2017-07-26T06:37:55Z | - |
dc.date.available | 2017-07-26T06:37:55Z | - |
dc.date.issued | 2016-05-11 | - |
dc.identifier.citation | Scientific Reports 6: 25749 (2016) | es_ES |
dc.identifier.issn | 2045-2322 | - |
dc.identifier.uri | http://hdl.handle.net/10261/153511 | - |
dc.description.abstract | Large-scale RNAseq has substantially changed the transcriptomics field, as it enables an unprecedented amount of high resolution data to be acquired. However, the analysis of these data still poses a challenge to the research community. Many tools have been developed to overcome this problem, and to facilitate the study of miRNA expression profiles and those of their target genes. While a few of these enable both kinds of analysis to be performed, they also present certain limitations in terms of their requirements and/or the restrictions on data uploading. To avoid these restraints, we have developed a suite that offers the identification of miRNA, mRNA and circRNAs that can be applied to any sequenced organism. Additionally, it enables differential expression, miRNA-mRNA target prediction and/or functional analysis. The miARma-Seq pipeline is presented as a stand-alone tool that is both easy to install and flexible in terms of its use, and that brings together well-established software in a single bundle. Our suite can analyze a large number of samples due to its multithread design. By testing miARma-Seq in validated datasets, we demonstrate here the benefits that can be gained from this tool by making it readily accessible to the research community. | es_ES |
dc.description.sponsorship | E.A.-L. was funded by the European Union grant FP7-REGPOT-2012-2013-1. | es_ES |
dc.language.iso | eng | es_ES |
dc.publisher | Nature Publishing Group | es_ES |
dc.relation | info:eu-repo/grantAgreement/EC/FP7/203953 | es_ES |
dc.relation.isversionof | Publisher's version | es_ES |
dc.rights | openAccess | es_ES |
dc.title | miARma-Seq: a comprehensive tool for miRNA, mRNA and circRNA analysis | es_ES |
dc.type | artículo | es_ES |
dc.identifier.doi | 10.1038/srep25749 | - |
dc.description.peerreviewed | Peer reviewed | es_ES |
dc.relation.publisherversion | http://doi.org/10.1038/srep25749 | es_ES |
dc.rights.license | http://creativecommons.org/licenses/by/4.0/ | es_ES |
dc.contributor.funder | European Commission | es_ES |
dc.relation.csic | Sí | es_ES |
oprm.item.hasRevision | no ko 0 false | * |
dc.identifier.funder | http://dx.doi.org/10.13039/501100000780 | es_ES |
dc.identifier.pmid | 27167008 | - |
dc.type.coar | http://purl.org/coar/resource_type/c_6501 | es_ES |
item.openairetype | artículo | - |
item.grantfulltext | open | - |
item.cerifentitytype | Publications | - |
item.openairecristype | http://purl.org/coar/resource_type/c_18cf | - |
item.fulltext | With Fulltext | - |
item.languageiso639-1 | en | - |
Aparece en las colecciones: | (IPBLN) Artículos (IBIS) Artículos |
Ficheros en este ítem:
Fichero | Descripción | Tamaño | Formato | |
---|---|---|---|---|
srep25749.pdf | 514,98 kB | Adobe PDF | Visualizar/Abrir |
CORE Recommender
PubMed Central
Citations
60
checked on 17-abr-2024
SCOPUSTM
Citations
106
checked on 15-abr-2024
WEB OF SCIENCETM
Citations
94
checked on 24-feb-2024
Page view(s)
311
checked on 19-abr-2024
Download(s)
222
checked on 19-abr-2024