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dc.contributor.authorVischer, Norbert O. E.-
dc.contributor.authorNatale, Paolo-
dc.contributor.authorVicente, Miguel-
dc.contributor.authorden Blaauwen, Tanneke-
dc.date.accessioned2017-07-14T11:05:39Z-
dc.date.available2017-07-14T11:05:39Z-
dc.date.issued2015-06-11-
dc.identifier.citationFrontiers in Microbiology 6: 586 (2015)-
dc.identifier.issn1664-302X-
dc.identifier.urihttp://hdl.handle.net/10261/152838-
dc.description.abstractThe rod-shaped Gram-negative bacterium Escherichia coli multiplies by elongation followed by binary fission. Longitudinal growth of the cell envelope and synthesis of the new poles are organized by two protein complexes called elongasome and divisome, respectively. We have analyzed the spatio-temporal localization patterns of many of these morphogenetic proteins by immunolabeling the wild type strain MC4100 grown to steady state in minimal glucose medium at 28°C. This allowed the direct comparison of morphogenetic protein localization patterns as a function of cell age as imaged by phase contrast and fluorescence wide field microscopy. Under steady state conditions the age distribution of the cells is constant and is directly correlated to cell length. To quantify cell size and protein localization parameters in 1000s of labeled cells, we developed ‘Coli-Inspector,’ which is a project running under ImageJ with the plugin ‘ObjectJ.’ ObjectJ organizes image-analysis tasks using an integrated approach with the flexibility to produce different output formats from existing markers such as intensity data and geometrical parameters. ObjectJ supports the combination of automatic and interactive methods giving the user complete control over the method of image analysis and data collection, with visual inspection tools for quick elimination of artifacts. Coli-inspector was used to sort the cells according to division cycle cell age and to analyze the spatio-temporal localization pattern of each protein. A unique dataset has been created on the concentration and position of the proteins during the cell cycle. We show for the first time that a subset of morphogenetic proteins have a constant cellular concentration during the cell division cycle whereas another set exhibits a cell division cycle dependent concentration variation. Using the number of proteins present at midcell, the stoichiometry of the divisome is discussed.-
dc.description.sponsorshipMP was funded by a grant form the Netherlands Organization for Scientific Research (NWO-ALW VIDI 864.09.015), TB, JL, WV, MV, and PN were funded by the European Commission Contract HEALTH-F3-2009-223431 (DIVINOCELL). MV and PN were also funded by the Ministerio de Ciencia e Innovación, Spanish Government Grants BIO2008-04478-C03-01 and BIO2011-28941-C03-01. WV was also funded by a Wellcome Trust Senior Investigator Award (WT101824AIA).-
dc.publisherFrontiers Media-
dc.relation.isversionofPublisher's version-
dc.rightsopenAccess-
dc.titleCell age dependent concentration of Escherichia coli divisome proteins analyzed with ImageJ and ObjectJ-
dc.typeartículo-
dc.identifier.doi10.3389/fmicb.2015.00586-
dc.description.peerreviewedPeer reviewed-
dc.relation.publisherversionhttp://dx.doi.org/10.3389/fmicb.2015.00586-
dc.date.updated2017-07-14T11:05:40Z-
dc.description.versionPeer Reviewed-
dc.language.rfc3066en-
dc.rights.holderCopyright © 2015 Vischer, Verheul, Postma, van den Berg van Saparoea, Galli, Natale, Gerdes, Luirink, Vollmer, Vicente and den Blaauwen.-
dc.rights.licensehttp://creativecommons.org/licenses/by/4.0/-
dc.contributor.funderNetherlands Organization for Scientific Research-
dc.contributor.funderEuropean Commission-
dc.contributor.funderMinisterio de Ciencia e Innovación (España)-
dc.contributor.funderWellcome Trust-
dc.relation.csic-
dc.identifier.funderhttp://dx.doi.org/10.13039/100004440es_ES
dc.identifier.funderhttp://dx.doi.org/10.13039/501100004837es_ES
dc.identifier.funderhttp://dx.doi.org/10.13039/501100000780es_ES
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