Please use this identifier to cite or link to this item:
logo share SHARE logo core CORE BASE
Visualizar otros formatos: MARC | Dublin Core | RDF | ORE | MODS | METS | DIDL | DATACITE

High quality draft genome sequences of Pseudomonas fulva DSM 17717T, Pseudomonas parafulva DSM 17004T and Pseudomonas cremoricolorata DSM 17059T type strains

AuthorsPeña, Arantxa; García-Valdés, Elena CSIC ORCID; Lalucat, Jorge CSIC ORCID
KeywordsP. cremoricolorata
Type strains
Genomic Encyclopedia of Type Strains (GEBA)
One Thousand Microbial Genomes Project (KMG-I)
P. fulva
P. parafulva
Issue Date1-Sep-2016
PublisherBioMed Central
CitationStandards in Genomic Sciences 11: 55 (2016)
AbstractPseudomonas has the highest number of species out of any genus of Gram-negative bacteria and is phylogenetically divided into several groups. The Pseudomonas putida phylogenetic branch includes at least 13 species of environmental and industrial interest, plant-associated bacteria, insect pathogens, and even some members that have been found in clinical specimens. In the context of the Genomic Encyclopedia of Bacteria and Archaea project, we present the permanent, high-quality draft genomes of the type strains of 3 taxonomically and ecologically closely related species in the Pseudomonas putida phylogenetic branch: Pseudomonas fulva DSM 17717, Pseudomonas parafulva DSM 17004 and Pseudomonas cremoricolorata DSM 17059. All three genomes are comparable in size (4.6-4.9Mb), with 4,119-4,459 protein-coding genes. Average nucleotide identity based on BLAST comparisons and digital genome-to-genome distance calculations are in good agreement with experimental DNA-DNA hybridization results. The genome sequences presented here will be very helpful in elucidating the taxonomy, phylogeny and evolution of the Pseudomonas putida species complex.
Publisher version (URL)
Identifiersdoi: 10.1186/s40793-016-0178-2
issn: 1944-3277
Appears in Collections:(IMEDEA) Artículos

Files in This Item:
File Description SizeFormat
High_quality_draft_genome-Pena.pdf924,32 kBAdobe PDFThumbnail
Show full item record
Review this work


checked on Nov 23, 2021

Google ScholarTM




WARNING: Items in Digital.CSIC are protected by copyright, with all rights reserved, unless otherwise indicated.