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| Visualizar otros formatos: MARC | Dublin Core | RDF | ORE | MODS | METS | DIDL | DATACITE | |
| Campo DC | Valor | Lengua/Idioma |
|---|---|---|
| dc.contributor.author | Cruz, Fernando | es_ES |
| dc.contributor.author | Cano Cabezas, Emilio | es_ES |
| dc.contributor.author | Galán, Beatriz | es_ES |
| dc.contributor.author | García, José Luis | es_ES |
| dc.contributor.author | Vargas, Pablo | es_ES |
| dc.contributor.author | Gabaldón, Toni | es_ES |
| dc.date.accessioned | 2016-07-26T09:36:18Z | - |
| dc.date.available | 2016-07-26T09:36:18Z | - |
| dc.date.issued | 2016 | - |
| dc.identifier.citation | GigaScience (2016) 5:29 | es_ES |
| dc.identifier.issn | 2047-217X | - |
| dc.identifier.uri | http://hdl.handle.net/10261/135037 | - |
| dc.description | 12 p.-6 fig.-5 tab. Fernando Cruz et al. | es_ES |
| dc.description.abstract | Background: The Mediterranean olive tree (Olea europaea subsp. europaea) was one of the first trees to be domesticated and is currently of major agricultural importance in the Mediterranean region as the source of olive oil. The molecular bases underlying the phenotypic differences among domesticated cultivars, or between domesticated olive trees and their wild relatives, remain poorly understood. Both wild and cultivated olive trees have 46 chromosomes (2n). | es_ES |
| dc.description.abstract | Findings: A total of 543 Gb of raw DNA sequence from whole genome shotgun sequencing, and a fosmid library containing 155,000 clones from a 1,000+ year-old olive tree (cv. Farga) were generated by Illumina sequencing using different combinations of mate-pair and pair-end libraries. Assembly gave a final genome with a scaffold N50 of 443 kb, and a total length of 1.31 Gb, which represents 95 % of the estimated genome length (1.38 Gb). In addition, the associated fungus Aureobasidium pullulans was partially sequenced. Genome annotation, assisted by RNA sequencing from leaf, root, and fruit tissues at various stages, resulted in 56,349 unique protein coding genes, suggesting recent genomic expansion. Genome completeness, as estimated using the CEGMA pipeline, reached 98.79 %. | es_ES |
| dc.description.abstract | Conclusions: The assembled draft genome of O. europaea will provide a valuable resource for the study of the evolution and domestication processes of this important tree, and allow determination of the genetic bases of key phenotypic traits. Moreover, it will enhance breeding programs and the formation of new varieties. | es_ES |
| dc.description.sponsorship | This project was funded by Banco Santander, which provided plant material and financed whole genome sequencing of the olive tree. The authors especially want to thank the late Mr. Emilio Botín for his support in driving this project. IJ was supported by a grant from the Peruvian Ministry of Education: ‘Beca Presidente de la República’ (2013-III). | es_ES |
| dc.language.iso | eng | es_ES |
| dc.publisher | BioMed Central | es_ES |
| dc.relation.isversionof | Publisher's version | es_ES |
| dc.rights | openAccess | es_ES |
| dc.subject | Olive tree genome | es_ES |
| dc.subject | Genomics | es_ES |
| dc.subject | Assembly | es_ES |
| dc.subject | Annotation | es_ES |
| dc.title | Genome sequence of the olive tree, Olea europaea | es_ES |
| dc.type | artículo | es_ES |
| dc.identifier.doi | 10.1186/s13742-016-0134-5 | - |
| dc.description.peerreviewed | Peer reviewed | es_ES |
| dc.relation.publisherversion | http://dx.doi.org/ 10.1186/s13742-016-0134-5 | es_ES |
| dc.identifier.e-issn | 2047-217X | - |
| dc.rights.license | http://creativecommons.org/licenses/by/4.0/ | es_ES |
| dc.contributor.funder | Banco Santander | es_ES |
| dc.relation.csic | Sí | es_ES |
| oprm.item.hasRevision | no ko 0 false | * |
| dc.identifier.funder | http://dx.doi.org/10.13039/100010784 | es_ES |
| dc.identifier.pmid | 27346392 | - |
| dc.type.coar | http://purl.org/coar/resource_type/c_6501 | es_ES |
| item.openairecristype | http://purl.org/coar/resource_type/c_18cf | - |
| item.fulltext | With Fulltext | - |
| item.cerifentitytype | Publications | - |
| item.openairetype | artículo | - |
| item.languageiso639-1 | en | - |
| item.grantfulltext | open | - |
| Aparece en las colecciones: | (CIB) Artículos | |
Ficheros en este ítem:
| Fichero | Descripción | Tamaño | Formato | |
|---|---|---|---|---|
| GIGASCIENCE_2016.pdf | Artículo principal | 1,02 MB | Adobe PDF |  Visualizar/Abrir |
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