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dc.contributor.authorCebrián, Jorge-
dc.contributor.authorCastán, Alicia-
dc.contributor.authorMartínez-Robles, María Luisa-
dc.contributor.authorHernandez, Pablo-
dc.contributor.authorKrimer, Dora B.-
dc.contributor.authorSchvartzman, Jorge Bernardo-
dc.date.issued2014-11-20-
dc.identifier.citationNucleic Acids Research, 2014es_ES
dc.identifier.issn0305-1048-
dc.identifier.urihttp://hdl.handle.net/10261/110205-
dc.description10 p.-7 fig.6 tab. Cebrián, Jorge et al. Este artículo forma parte de tesis doctoral https://digital.csic.es/handle/10261/120925es_ES
dc.description.abstractWe systematically varied conditions of twodimensional(2D) agarose gel electrophoresis to optimize separation of DNA topoisomers that differ either by the extent of knotting, the extent of catenation or the extent of supercoiling. To this aim we compared electrophoretic behavior of three different families of DNA topoisomers: (i) supercoiled DNA molecules, where supercoiling covered the range extending from covalently closed relaxed up to naturally supercoiled DNA molecules; (ii) postreplicative catenanes with catenation number increasing from 1 to ∼15, where both catenated rings were nicked; (iii) knotted but nicked DNA molecules with a naturally arising spectrum of knots. For better comparison, we studied topoisomer families where each member had the same total molecular mass. For knotted and supercoiled molecules, we analyzed dimeric plasmids whereas catenanes were composed of monomeric forms of the same plasmid. We observed that catenated, knotted and supercoiled families of topoisomers showed different reactions to changes of agarose concentration and voltage during electrophoresis.These differences permitted us to optimize conditions for their separation and shed light on physical characteristics of these different types of DNA topoisomers during electrophoresis.es_ES
dc.description.sponsorshipSpanish Ministerio de Economía y Competitividad [BFU2011-22489 to J.B.S.]; Leverhulme Trust [RP2013-K-017 to A.S.]. Funding for open access charge: Spanish Downloaded from http://nar.oxfordjournals.org/ at Centro de Información y Documentación Científica on February 3, 2015 Nucleic Acids Research, 2014 9 Ministerio de Economía y Competitividad [BFU2011-22489 to J.B.S.]; Leverhulme Trust [RP2013-K-017 to A.S.].es_ES
dc.language.isoenges_ES
dc.publisherOxford University Presses_ES
dc.relation.isversionofPublisher's versiones_ES
dc.rightsopenAccesses_ES
dc.titleElectrophoretic mobility of supercoiled, catenated and knotted DNA moleculeses_ES
dc.typeartículoes_ES
dc.identifier.doi10.1093/nar/gku1255-
dc.description.peerreviewedPeer reviewedes_ES
dc.relation.publisherversionhttp://dx.doi.org/10.1093/nar/gku1255es_ES
dc.identifier.e-issn1362-4962-
dc.rights.licensehttps://creativecommons.org/licenses/by/4.0/es_ES
dc.relation.csices_ES
dc.identifier.pmid25414338-
dc.type.coarhttp://purl.org/coar/resource_type/c_6501es_ES
item.openairecristypehttp://purl.org/coar/resource_type/c_18cf-
item.fulltextWith Fulltext-
item.cerifentitytypePublications-
item.openairetypeartículo-
item.languageiso639-1en-
item.grantfulltextopen-
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