2024-03-28T09:56:27Zhttp://digital.csic.es/dspace-oai/requestoai:digital.csic.es:10261/458142021-12-28T16:17:20Zcom_10261_112com_10261_1col_10261_365
2012-02-17T10:12:39Z
urn:hdl:10261/45814
GATExplorer: Genomic and Transcriptomic Explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs
Risueño, A.
Fontanillo, Celia
Dinger, Marcel E.
De Las Rivas, Javier
This is an Open Access article distributed under the terms of the Creative Commons
Attribution License.-- et al.
Genome-wide expression studies have developed exponentially in recent years as a result of extensive use of microarray technology. However, expression signals are typically calculated using the assignment of "probesets" to genes, without addressing the problem of "gene" definition or proper consideration of the location of the measuring probes in the context of the currently known genomes and transcriptomes. Moreover, as our knowledge of metazoan genomes improves, the number of both protein-coding and noncoding genes, as well as their associated isoforms, continues to increase. Consequently, there is a need for new databases that combine genomic and transcriptomic information and provide updated mapping of expression probes to current genomic annotations.
2012-02-17T10:12:39Z
2012-02-17T10:12:39Z
2010-04-29
artículo
BMC Bioinformatics 11: 221 (2010)
1471-2105
http://hdl.handle.net/10261/45814
10.1186/1471-2105-11-221
1471-2105
20429936
eng
Publisher’s version
http://dx.doi.org/doi:10.1186/1471-2105-11-221
openAccess
BioMed Central