2024-03-29T09:53:59Zhttp://digital.csic.es/dspace-oai/requestoai:digital.csic.es:10261/2296712021-10-01T11:43:27Zcom_10261_25com_10261_1col_10261_278
2021-02-15T13:30:31Z
urn:hdl:10261/229671
PolishEM: image enhancement in FIB-SEM
Fernández, José Jesús
Torres, Teobaldo E.
Martin-Solana, Eva
Goya, Gerardo F.
Fernández Fernández, M.ª del Rosario
Ministerio de Ciencia, Innovación y Universidades (España)
Agencia Estatal de Investigación (España)
Fundación Ramón Areces
[Summary]: We have developed a software tool to improve the image quality in focused ion beam–scanning electron microscopy (FIB–SEM) stacks: PolishEM. Based on a Gaussian blur model, it automatically estimates and compensates for the blur affecting each individual image. It also includes correction for artifacts commonly arising in FIB–SEM (e.g. curtaining). PolishEM has been optimized for an efficient processing of huge FIB–SEM stacks on standard computers.
[Availability and implementation]: PolishEM has been developed in C. GPL source code and binaries for Linux, OSX and Windows are available at
2021-02-15T13:30:31Z
2021-02-15T13:30:31Z
2020-06-15
2021-02-15T13:30:32Z
artículo
Bioinformatics 36(12): 3947-3948 (2020)
1367-4811
http://hdl.handle.net/10261/229671
10.1093/bioinformatics/btaa218
1460-2059
http://dx.doi.org/10.13039/501100011033
http://dx.doi.org/10.13039/100008054
http://dx.doi.org/10.1093/bioinformatics/btaa218
Sí
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/SAF2017-84565-R
SAF2017-84565-R/AEI/10.13039/501100011033
closedAccess
Oxford University Press