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openAccesss41586-020-2876-6.pdf.jpg12-Nov-2020A comparative genomics multitool for scientific discovery and conservationGenereux, Diane P.; Serres-Armero, Aitor CSIC; Armstrong, Joel; Johnson, Jeremy; Marinescu, Voichita D.; Murén, Eva; Juan, David CSIC ORCID ; Bejerano, Gill; Casewell, Nicholas R.; Chemnick, Leona G.; Damas, Joana; Di Palma, Federica; Diekhans, Mark; Fiddes, Ian T.; Garber, Manuel; Gladyshev, Vadim N.; Goodman, Linda; Haerty, Wilfried; Houck, Marlys L.; Hubley, Robert; Kivioja, Teemu; Koepfli, Klaus-Peter; Kuderna, Lukas F. K. CSIC ORCID; Lander, Eric S.; Meadows, Jennifer R.S.; Murphy, William J.; Nash, Will; Noh, Hyun Ji; Nweeia, Martin; Pfenning, Andreas R.; Pollard, Katherine S.; Ray, David A.; Shapiro, Beth; Smit, Arian F. A.; Springer, Mark S.; Steiner, Cynthia C.; Swofford, Ross; Taipale, Jussi; Teeling, Emma C.; Turner-Maier, Jason; Alfoldi, Jessica; Birren, Bruce; Ryder, Oliver A.; Lewin, Harris A.; Paten, Benedict; Marqués-Bonet, Tomàs CSIC ORCID ; Lindblad-Toh, Kerstin; Karlsson, Elinor K.artículo
openAccessDescribing-variability-in-pig-genes-involved-in-coronavirus.pdf.jpg9-Feb-2021Describing variability in pig genes involved in coronavirus infections for a One Health perspective in conservation of animal genetic resourcesBovo, Samuele CSIC; Schiavo, Giuseppina; Ribani, Anisa; Utzeri, Valerio J.; Taurisano, Valeria; Ballan, Mohamad; Muñoz, María; Alves, Estefania; Araújo, José Pedro; Bozzi, Riccardo; Charneca, Rui; Di Palma, Federica; Djurkin Kušec, Ivona; Etherington, Graham; Fernández, Ana Isabel; Suárez García, Fabián CSIC ORCID ; García Casco, Juan María; Karolyi, Danijel; Gallo, Maurizio; Martins, José Manuel; Mercat, Marie-José; Núñez, Yolanda; Quintanilla, Raquel; Radović, Čedomir; Razmaite, Violeta; Riquet, Juliette; Savić, Radomir; Škrlep, Martin; Usai, Graziano; Zimmer, Christoph; Óvilo Martín, Cristina; Fontanesi, Lucaartículo
closedAccessoficial.pdf.jpg8-Jun-2020Genome-wide detection of copy number variants in European autochthonous and commercial pig breeds by whole-genome sequencing of DNA pools identified breed-characterising copy number statesBovo, Samuele CSIC; Ribani, Anisa; Muñoz, Marina; Alves, Estefania; Araújo, José Pedro; Bozzi, Riccardo; Charneca, Rui; Di Palma, Federica; Etherington, Graham; Fernández, Ana Isabel; García, Fabián; García Casco, Juan María; Karolyi, Danijel; Gallo, Maurizio; Gvozdanović, Kristina; Martins, José Manuel; Mercat, Marie-José; Núñez, Yolanda; Quintanilla, Raquel; Radović, Čedomir; Razmaite, Violeta; Riquet, Juliette; Savić, Radomir; Schiavo, Giuseppina; Škrlep, Martin; Usai, Graziano; Utzeri, Valerio J.; Zimmer, Christoph; Óvilo Martín, Cristina; Fontanesi, Lucaartículo
openAccessStandards_Earth_BioGenome_Project.pdf.jpg18-Jan-2022Standards recommendations for the Earth BioGenome ProjectLawniczak, Mara K. N.; Durbin, Richard; Flicek, Paul; Lindblad-Toh, Kerstin; Wei, Xiaofeng; Archibald, John M.; Baker, William J.; Belov, Katherine; Blaxter, Mark; Marqués-Bonet, Tomàs CSIC ORCID ; Childers, Anna K.; Coddington, Jonathan A.; Crandall, Keith A.; Crawford, Andrew J.; Davey, Robert P.; Di Palma, Federica; Fang, Qi; Haerty, Wilfried; Hall, Neil; Hoff, Katharina J.; Howe, Kerstin; Jarvis, Erich D.; Johnson, Warren E.; Johnson, Rebecca N.; Kersey, Paul J.; Liu, Xin; López, José Víctor; Myers, Eugene W.; Vinnere Pettersson, Olga; Phillippy, Adam M.; Poelchau, Monica F.; Pruitt, kim D.; Rhie, Arang; Castilla-Rubio, Juan Carlos; Kumar Sahu, Sunil; Salmon, Nicholas A.; Soltis, Pamela S.; Swarbreck, David; Thibaud-Nissen, Francoise; Wang, Sibo; Wegrzyn, Jill L.; Zhang, Guojie; Zhang, He; Lewin, Harris A.; Richards, Stephenartículo
openAccesspnas.2115639118.sapp.pdf.jpgOct-2021Supplementary Tables and Legends Standards Recommendations for the Earth BioGenome ProjectLawniczak, Mara K. N.; Durbin, Richard; Flicek, Paul; Lindblad-Toh, Kerstin; Wei, Xiaofeng; Archibald, John M.; Baker, William J.; Belov, Katherine; Blaxter, Mark; Marqués-Bonet, Tomàs CSIC ORCID ; Childers, Anna K.; Coddington, Jonathan A.; Crandall, Keith A.; Crawford, Andrew J.; Davey, Robert P.; Di Palma, Federica; Fang, Qi; Haerty, Wilfried; Hall, Neil; Hoff, Katharina J.; Howe, Kerstin; Jarvis, Erich D.; Johnson, Warren E.; Johnson, Rebecca N.; Kersey, Paul J.; Liu, Xin; López, José Víctor; Myers, Eugene W.; Vinnere Pettersson, Olga; Phillippy, Adam M.; Poelchau, Monica F.; Pruitt, kim D.; Rhie, Arang; Castilla-Rubio, Juan Carlos; Kumar Sahu, Sunil; Salmon, Nicholas A.; Soltis, Pamela S.; Swarbreck, David; Thibaud-Nissen, Francoise; Wang, Sibo; Wegrzyn, Jill L.; Zhang, Guojie; Zhang, He; Lewin, Harris A.; Richards, Stephendataset
openAccessvertebrate_species.pdf.jpg29-Apr-2021Towards complete and error-free genome assemblies of all vertebrate speciesRhie, Arang; McCarthy, Shane A.; Fedrigo, Olivier; Damas, Joana; Formenti, Giulio; Koren, Sergey; Uliano-Silva, Marcela; Chow, William; Fungtammasan, Arkarachai; Kim, Juwan; Lee, Chul; Haase, Bettina; Mountcastle, Jacquelyn; Winkler, Sylke; Paez, Sadye; Howard, Jason; Vernes, Sonja C; Lama, Tanya M; Grützner, Frank; Warren, Wesley C.; Balakrishnan, Christopher N.; Pippel, Martin; Burt, Dave; George, Julia M.; Biegler, Matthew T.; Iorns, David; Digby, Andrew; Eason, Daryl; Robertson, Bruce; Edwards, Taylor; Wilkinson, Mark; Turner, George; Malinsky, Milan; Meyer, Axel; Kautt, Andreas F.; Franchini, Paolo; Detrich III, H. William; Svardal, Hannes; Wagner, Maximilian; Naylor, Gavin J. P.; Mooney, Mark; Simbirsky, Maria; Hannigan, Brett T.; Pesout, Trevor; Houck, Marlys L.; Misuraca, Ann; Kingan, Sarah B.; Hall, Richard; Wood, Jonathan; Kronenberg, Zev; Sović, Ivan; Dunn, Christopher; Ning, Zemin; Hastie, Alex; Lee, Joyce; Selvaraj, Siddarth; Green, Richard E.; Putnam, Nicholas H.; Gut, Ivo; Dagnew, Robel E.; Ghurye, Jay; Garrison, Erik; Sims, Ying; Collins, Joanna; Pelan, Sarah; Torrance, James; Tracey, Alan; Guan, Dengfeng; London, Sarah E.; Clayton, David F.; Mello, Claudio V.; Friedrich, Samantha R.; Lovell, Peter V.; Osipova, Ekaterina; Al-Ajli, Farooq O.; Diekhans, Mark; Secomandi, Simona; Kim, Heebal; Theofanopoulou, Constantina; Hiller, Michael; Zhou, Yang; Harris, Robert S.; Makova, Kateryna D.; Medvedev, Paul; Hoffman, Jinna; Masterson, Patrick; Nassar, Luis; Clark, Karen; Martin, Fergal; Howe, Kevin; Flicek, Paul; Walenz, Brian P.; Kwak, Woori; Clawson, Hiram; Paten, Benedict; Kraus, Robert H. S.; Crawford, Andrew J.; Gilbert, M. Thomas P.; Zhang, Guojie; Venkatesh, Byrappa; Murphy, Robert W.; Koepfli, Klaus-Peter; Ko, Byung June; Shapiro, Beth; Johnson, Warren E.; Di Palma, Federica; Marqués-Bonet, Tomàs CSIC ORCID ; Teeling, Emma C.; Warnow, Tandy; Marshall Graves, Jennifer; Ryder, Oliver A.; Haussler, David; O’Brien, Stephen J.; Chaisson, Mark; Korlach, Jonas; Lewin, Harris A.; Howe, Kerstin; Myers, Eugene W.; Durbin, Richard; Phillippy, Adam M.; Jarvis, Erich D.; Gedman, Gregory L.; Cantin, Lindsey J.; Thibaud-Nissen, Francoise; Haggerty, Leanne; Bista, Iliana; Smith, Michelleartículo
openAccessWhole_genome_sequencing.pdf.jpg26-Jun-2020Whole-genome sequencing of European autochthonous and commercial pig breeds allows the detection of signatures of selection for adaptation of genetic resources to different breeding and production systemsBovo, Samuele CSIC; Ribani, Anisa; Muñoz, María; Alves, Estefania; Araújo, José Pedro; Bozzi, Riccardo; Čandek-Potokar, M.; Charneca, Rui; Di Palma, Federica; Etherington, Graham; Fernández, Ana Isabel; Suárez García, Fabián CSIC ORCID ; García Casco, Juan María; Karolyi, Danijel; Gallo, Maurizio; Margeta, Vladimir; Martins, José Manuel; Mercat, Marie-José; Moscatelli, Giulia; Núñez, Yolanda; Quintanilla, Raquel; Radović, Čedomir; Razmaite, Violeta; Riquet, Juliette; Savić, Radomir; Schiavo, Giuseppina; Usai, Graziano; Utzeri, Valerio J.; Zimmer, Christoph; Óvilo Martín, Cristina; Fontanesi, Lucaartículo