Rights | Preview | Issue Date | Title | Author(s) | Type |
openAccess |  | 30-Dec-2019 | A benchmark of transposon insertion detection tools using real data | Vendrell-Mir, Pol CSIC ORCID; Barteri, Fabio CSIC; Merenciano, Miriam CSIC ORCID; González Pérez, Josefa CSIC ORCID ; Casacuberta, Josep M. CSIC ORCID; Castanera, Raúl CSIC ORCID | artículo |
openAccess |  | 26-May-2022 | Absence of major epigenetic and transcriptomic changes accompanying an interspecific cross between peach and almond | Tomás, Carlos de CSIC; Bardil, Amélie CSIC ORCID; Castanera, Raúl CSIC ORCID; Casacuberta, Josep M. CSIC ORCID; Vicient, Carlos M. CSIC ORCID | artículo |
closedAccess |  | 2021 | Amplification dynamics of miniature inverted-repeat transposable elements and their impact on rice trait variability | Castanera, Raúl CSIC ORCID; Vendrell-Mir, Pol CSIC ORCID; Bardil, Amélie CSIC ORCID; Carpentier, Marie-Christine; Panaud, Olivier; Casacuberta, Josep M. CSIC ORCID | artículo |
openAccess |  | 2020 | An improved melon reference genome with single-molecule sequencing uncovers a recent burst of transposable elements with potential impact on genes | Castanera, Raúl CSIC ORCID; Ruggieri, Valentino CSIC ORCID; Pujol, Marta CSIC ORCID; García-Mas, Jordi CSIC ORCID; Casacuberta, Josep M. CSIC ORCID | artículo |
openAccess |  | Jul-2021 | El análisis de 52 genomas fúngicos aclara la evolución de los estilos de vida de los Agaricales | Ruiz-Dueñas, F. J. CSIC ORCID ; Barrasa González, José María; Sánchez-García, Marisol; Camarero, Susana CSIC ORCID ; Miyauchi, Shingo; Serrano, Ana; Linde, Dolores CSIC ORCID ; Babiker, Rashid; Drula, Elodie; Ayuso-Fernández, Iván CSIC ORCID; Pacheco, Remedios CSIC; Padilla, Guillermo CSIC ; Ferreira, Patricia CSIC ORCID; Barriuso, Jorge CSIC ORCID ; Kellner, H.; Castanera, Raúl CSIC ORCID; Alfaro, Manuel; Ramírez, Lucía; Pisabarro, Antonio G.; Riley, Robert; Kuo, Alan; Andreopoulos, William; LaButti, Kurt M.; Pangilinan, Jasmyn; Tritt, Andrew; Lipzen, Anna; He, Guifen; Yan, Mi; Ng, Vivian; Grigoriev, Igor V.; Cullen, Daniel; Martin, Francis; Rosso, Marie-Noëlle; Henrissat, Bernard; Hibbett, David S.; Martínez, Ángel T. CSIC ORCID | comunicación de congreso |
openAccess |  | Mar-2014 | Differential expression of ligninolytic peroxidase genes by pleurotus ostreatus growing on lignocellulose medium under different environmental conditions | Fernández-Fueyo, Elena CSIC ORCID; Castanera, Raúl CSIC ORCID; Ruiz-Dueñas, F. J. CSIC ORCID ; López-Lucendo, María F. CSIC; Ramírez, Lucía; Pisabarro, Antonio G.; Martínez, Ángel T. CSIC ORCID | comunicación de congreso |
openAccess |  | 2019 | Distribution, characteristics, and regulatory potential of long noncoding RNAs in brown-rot fungi | Borgognone, Alessandra; Sanseverino, Walter; Aiese Cigliano, Riccardo; Castanera, Raúl CSIC ORCID | artículo |
closedAccess |  | 2019 | Dynamics and impact of transposable elements on crop plants | Castanera, Raúl CSIC ORCID; Casacuberta, Josep M. CSIC ORCID | comunicación de congreso |
closedAccess |  | 2021 | From TEs to traits: A population-wide perspective of rice transposon activity / Virus-like particles (VLPs): the use of biotechnology to control virus spread | Castanera, Raúl CSIC ORCID; Ferriol, Inmaculada CSIC ORCID | comunicación de congreso |
openAccess |  | 19-Nov-2020 | Genomic analysis enlightens agaricales lifestyle evolution and increasing peroxidase diversity | Ruiz-Dueñas, F. J. CSIC ORCID ; Barrasa González, José María; Sánchez-García, Marisol; Camarero, Susana CSIC ORCID ; Miyauchi, Shingo; Serrano, Ana; Linde, Dolores CSIC ORCID ; Babiker, Rashid; Drula, Elodie; Ayuso-Fernández, Iván CSIC ORCID; Pacheco, Remedios CSIC; Padilla, Guillermo CSIC ; Ferreira, Patricia CSIC ORCID; Barriuso, Jorge CSIC ORCID ; Kellner, H.; Castanera, Raúl CSIC ORCID; Alfaro, Manuel; Ramírez, Lucía; Pisabarro, Antonio G.; Riley, Robert; Kuo, Alan; Andreopoulos, William; LaButti, Kurt M.; Pangilinan, Jasmyn; Tritt, Andrew; Lipzen, Anna; He, Guifen; Yan, Mi; Ng, Vivian; Grigoriev, Igor V.; Cullen, Daniel; Martin, Francis; Rosso, Marie-Noëlle; Henrissat, Bernard; Hibbett, David S.; Martínez, Ángel T. CSIC ORCID | artículo |
openAccess |  | 2022 | Improved high-quality genome assembly and annotation of pineapple (Ananas comosus) cultivar md2 revealed extensive haplotype diversity and diversified frs/frf gene family | Yow, Ashley G.; Bostan, Hamed; Castanera, Raúl CSIC ORCID; Ruggieri, Valentino CSIC ORCID; Mengist, Molla F.; Curaba, Julien; Young, Roberto; Gillitt, Nicholas; Iorizzo, Massimo | artículo |
closedAccess |  | Jul-2022 | Lifestyle Evolution And Peroxidase Diversity In Agaricales As Revealed By Comparative Genomics | Ruiz-Dueñas, F. J. CSIC ORCID ; Barrasa González, José María; Sánchez-Ruiz, María I. CSIC ORCID; Ayuso-Fernández, Iván CSIC ORCID; Sánchez García, Marisol; Camarero, Susana CSIC ORCID ; Miyauchi, S; Serrano-Lotina, Ana M.; Linde, Dolores CSIC ORCID; Babiker, Rashid; Rencoret, Jorge CSIC ORCID; Davó-Siguero, Irene; Drula, Elodie; Pacheco, Remedios CSIC; Padilla, Guillermo CSIC ; Ferreira, Patricia CSIC ORCID; Barriuso, Jorge CSIC ORCID ; Kellner, H.; Castanera, Raúl CSIC ORCID; Alfaro, Manuel; Ramírez, Lucía; Pisabarro, Antonio G.; Riley, Robert; Kuo, Alan; Andreopoulos, William; LaButti, Kurt M.; Pangilinan, Jasmyn; Tritt, Andrew; Lipzen, Anna; He, Guifen; Yan, Mi; Gutiérrez Suárez, Ana CSIC ORCID ; Romero, Antonio CSIC ORCID; Ng, Vivian; Grigoriev, Igor V.; Cullen, Daniel; Martin, Francis; Rosso, Marie-Noëlle; Henrissat, Bernard; Hibbett, David S.; Martínez, Ángel T. CSIC ORCID | comunicación de congreso |
openAccess |  | 18-Feb-2014 | Ligninolytic peroxidase gene expression by Pleurotus ostreatus: Differential regulation in lignocellulose medium and effect of temperature and pH | Fernández-Fueyo, Elena CSIC ORCID; Castanera, Raúl CSIC ORCID; Ruiz-Dueñas, F. J. CSIC ORCID ; López-Lucendo, María F. CSIC; Ramírez, Lucía; Pisabarro, Antonio G.; Martínez, Ángel T. CSIC ORCID | artículo |
closedAccess |  | 2020 | LTR-retrotransposons in peach and almond: same elements, different activity | Bardil, Amélie CSIC ORCID; Tomás, Carlos de CSIC; Castanera, Raúl CSIC ORCID; Vicient, Carlos M. CSIC ORCID; Casacuberta, Josep M. CSIC ORCID | comunicación de congreso |
openAccess |  | 15-Feb-2020 | T-lex3: an accurate tool to genotype and estimate population frequencies of transposable elements using the latest short-read whole genome sequencing data | Bogaerts-Márquez, María CSIC ORCID; Barrón, Maite G. CSIC ORCID; Fiston-Lavier, Anna-Sophie; Vendrell-Mir, Pol CSIC ORCID; Castanera, Raúl CSIC ORCID; Casacuberta, Josep M. CSIC ORCID; González Pérez, Josefa CSIC ORCID | artículo |
openAccess |  | Sep-2022 | Transposable element polymorphisms improve prediction of complex agronomic traits in rice | Vourlaki, Ioanna-Theoni CSIC; Castanera, Raúl CSIC ORCID; Ramos-Onsins, Sebastian E. CSIC ORCID; Casacuberta, Josep M. CSIC ORCID; Pérez-Enciso, Miguel CSIC ORCID | artículo |
openAccess | | 2022 | Transposable element polymorphisms improve prediction of complex agronomic traits in rice [Dataset] | Vourlaki, Ioanna-Theoni CSIC; Castanera, Raúl CSIC ORCID; Ramos-Onsins, Sebastian E. CSIC ORCID; Casacuberta, Josep M. CSIC ORCID; Pérez-Enciso, Miguel CSIC ORCID | dataset; datos genómicos |
openAccess |  | 2020 | Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence | Alioto, Tyler S.; Alexiou, Konstantinos G. CSIC ORCID; Bardil, Amélie CSIC ORCID; Barteri, Fabio CSIC; Castanera, Raúl CSIC ORCID; Cruz, Fernando CSIC ORCID; Dhingra, Amit; Duval, Henri; Fernández i Marti, Ángel; Frías, Leonor; Galán, Beatriz CSIC ORCID ; García, José Luis CSIC ORCID ; Howad, Werner CSIC ORCID; Gómez-Garrido, Jèssica; Gut, Marta; Julca, Irene; Morata, Jordi CSIC ORCID; Puigdomènech, Pere CSIC; Ribeca, Paolo; Rubio-Cabetas, María José; Vlasova, Anna; Wirthensohn, Michelle G.; García-Mas, Jordi CSIC ORCID; Gabaldón, Toni; Casacuberta, Josep M. CSIC ORCID; Arús, Pere CSIC ORCID | artículo |