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Browsing by Author Bastolla, Ugo

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closedAccessaccesoRestringido.pdf.jpg2010181-196 Quantifying the evolutionary divergence of protein structures: The role of function change and function conservationPascual-García, Alberto ; Abia, David  ; Méndez, Raúl ; Nido, Gonzalo S. ; Bastolla, Ugo artículo
closedAccessaccesoRestringido.pdf.jpg2008An efficient conformational sampling method for homology modelingHan, Rongsheng; Leo-Macías, Alejandra ; Zerbino, Daniel; Bastolla, Ugo ; Contreras-Moreira, Bruno  ; Ortiz, Ángel R. artículo
openAccess12866_2014_Article_284.pdf.jpg4-Dec-2014Bacteria dialog with Santa Rosalia: Are aggregations of cosmopolitan bacteria mainly explained by habitat filtering or by ecological interactions?Pascual-García, Alberto ; Tamames, Javier; Bastolla, Ugo artículo
openAccessBastollaU_CanConformationalChanges.pdf.jpg10-Oct-2019Can Conformational Changes of Proteins Be Represented in Torsion Angle Space? A Study with Rescaled Ridge RegressionBastolla, Ugo ; Dehouck, Yvesartículo
closedAccessaccesoRestringido.pdf.jpg2013Characterizing conformation changes in proteins through the torsional elastic responseDos Santos, Helena G.; Klett, Javier ; Méndez, Raúl ; Bastolla, Ugo artículo
openAccess1471-2148-10-178.pdf.jpg14-Jun-2010Comparison of translation loads for standard and alternative genetic codesSammet, Stefanie Gabriele; Bastolla, Ugo ; Porto, Markusartículo
openAccess APascual-García_PlosProtStruc_10000331.pdf.jpg27-Mar-2009Cross-Over between Discrete and Continuous Protein Structure Space: Insights into Automatic Classification and Networks of Protein StructuresPascual-García, Alberto ; Abia, David  ; Ortiz, Ángel R. ; Bastolla, Ugo artículo
closedAccessaccesoRestringido.pdf.jpg2013Detecting selection for negative design in proteins through an improved model of the misfolded stateMinning, Jonas; Porto, Markus; Bastolla, Ugo artículo
openAccessU_Bastolla_Biomolecules.pdf.jpg16-Jul-2014Detecting Selection on Protein Stability through Statistical Mechanical Models of Folding and EvolutionBastolla, Ugo artículo
openAccessdiffereorigi.pdf.jpg2019Differences in firing efficiency, chromatin, and transcription underlie the developmental plasticity of the Arabidopsis DNA replication originsSequeira-Mendes, Joana ; Vergara, Zaida ; Peiró-Pastor, Ramón ; Morata, Jordi; Aragüez, Irene; Costas, Celina; Méndez, Raúl ; Casacuberta, Josep M. ; Bastolla, Ugo ; Gutiérrez Armenta, Crisanto artículo
closedAccessaccesoRestringido.pdf.jpg2008Effective connectivity profile: A structural representation that evidences the relationship between protein structures and sequencesBastolla, Ugo ; Ortiz, Ángel R. ; Porto, Markus; Teichert, Florianartículo
closedAccessaccesoRestringido.pdf.jpg2014Emergence of structure through protein¿protein interactions and pH changes in dually predicted coiled-coil and disordered regions of centrosomal proteins.Treviño, Miguel A. ; García-Mayoral, M.F. ; Jiménez, M. Angeles  ; Bastolla, Ugo ; Bruix, M. artículo
openAccess1471-2105-11-251.pdf.jpg14-May-2010High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTHTeichert, Florian; Minning, Jonas; Bastolla, Ugo ; Porto, Markusartículo
closedAccessaccesoRestringido.pdf.jpg2013High-resolution analysis of DNA synthesis start sites and nucleosome architecture at efficient mammalian replication originsLombraña, Rodrigo ; Almeida, Ricardo ; Revuelta, Isabel; Madeira, Sofía ; Herranz, Gonzalo; Saiz, Néstor; Bastolla, Ugo ; Gómez, María artículo
openAccessPaper_Coronavirus.pdf.jpg1-Apr-2020How lethal is the novel coronavirus, and how many undetected cases there are? The importance of being testedBastolla, Ugo artículo
closedAccess24-Nov-2009In Memoriam of Angel R. Ortiz (1966-2008)Abia, David  ; Bastolla, Ugo ; Chacón, Pablo ; Fábrega Clavería, Carme; Gago, Federico ; Morreale, Antonio ; Tramontano, Annaartículo
openAccessBastollaU_InfluenceOfMutation.pdf.jpg5-Oct-2018Influence of mutation bias and hydrophobicity on the substitution rates and sequence entropies of protein evolutionJiménez-Santos, María José  ; Arenas, Miguel ; Bastolla, Ugo artículo
closedAccessaccesoRestringido.pdf.jpg2008Local interactions in protein folding determined through an inverse folding modelBastolla, Ugo ; Porto, Markus; Ortiz, Ángel R. artículo
openAccessaccesoRestringido.pdf.jpg29-Sep-2020Mathematical model of SARS-Cov-2 propagation versus ACE2 fits COVID-19 lethality across age and sex and predicts that of SARS, supporting possible therapyBastolla, Ugo preprint
openAccessBastolla U Maximum Likelihood.pdf.jpg2-Apr-2015Maximum-Likelihood Phylogenetic Inference with Selection on Protein Folding Stability.Arenas, Miguel ; Sánchez-Cobos, Agustin; Bastolla, Ugo artículo