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Browsing by Author Bastolla, Ugo

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closedAccessaccesoRestringido.pdf.jpg2010181-196 Quantifying the evolutionary divergence of protein structures: The role of function change and function conservationPascual-García, Alberto CSIC; Abia, David CSIC ORCID ; Méndez, Raúl CSIC; Nido, Gonzalo S.; Bastolla, Ugo CSIC ORCIDartículo
closedAccessaccesoRestringido.pdf.jpg2008An efficient conformational sampling method for homology modelingHan, Rongsheng; Leo-Macías, Alejandra CSIC ORCID; Zerbino, Daniel; Bastolla, Ugo CSIC ORCID; Contreras-Moreira, Bruno CSIC ORCID ; Ortiz, Ángel R. CSICartículo
openAccess12866_2014_Article_284.pdf.jpg4-Dec-2014Bacteria dialog with Santa Rosalia: Are aggregations of cosmopolitan bacteria mainly explained by habitat filtering or by ecological interactions?Pascual-García, Alberto CSIC; Tamames, Javier; Bastolla, Ugo CSIC ORCIDartículo
openAccessBastollaU_CanConformationalChanges.pdf.jpg10-Oct-2019Can Conformational Changes of Proteins Be Represented in Torsion Angle Space? A Study with Rescaled Ridge RegressionBastolla, Ugo CSIC ORCID; Dehouck, Yvesartículo
closedAccessaccesoRestringido.pdf.jpg2013Characterizing conformation changes in proteins through the torsional elastic responseDos Santos, Helena G.; Klett, Javier CSIC ORCID; Méndez, Raúl CSIC; Bastolla, Ugo CSIC ORCIDartículo
openAccess1471-2148-10-178.pdf.jpg14-Jun-2010Comparison of translation loads for standard and alternative genetic codesSammet, Stefanie Gabriele; Bastolla, Ugo CSIC ORCID; Porto, Markusartículo
openAccess APascual-García_PlosProtStruc_10000331.pdf.jpg27-Mar-2009Cross-Over between Discrete and Continuous Protein Structure Space: Insights into Automatic Classification and Networks of Protein StructuresPascual-García, Alberto CSIC; Abia, David CSIC ORCID ; Ortiz, Ángel R. CSIC; Bastolla, Ugo CSIC ORCIDartículo
closedAccessaccesoRestringido.pdf.jpg2013Detecting selection for negative design in proteins through an improved model of the misfolded stateMinning, Jonas; Porto, Markus; Bastolla, Ugo CSIC ORCIDartículo
openAccessU_Bastolla_Biomolecules.pdf.jpg16-Jul-2014Detecting Selection on Protein Stability through Statistical Mechanical Models of Folding and EvolutionBastolla, Ugo CSIC ORCIDartículo
openAccess6-May-2019Differences in firing efficiency, chromatin, and transcription underlie the developmental plasticity of the Arabidopsis DNA replication originsSequeira-Mendes, Joana CSIC ORCID; Vergara, Zaida ORCID; Peiró, Ramón; Morata, Jordi; Aragüez, Irene; Costas, Celina; Mendez-Giraldez, Raúl; Casacuberta, Josep M. CSIC ORCID; Bastolla, Ugo CSIC ORCID; Gutiérrez, Crisantoartículo
openAccessdiffereorigi.pdf.jpg2019Differences in firing efficiency, chromatin, and transcription underlie the developmental plasticity of the Arabidopsis DNA replication originsSequeira-Mendes, Joana CSIC ORCID; Vergara, Zaida ORCID; Peiró-Pastor, Ramón CSIC ORCID; Morata, Jordi; Aragüez, Irene; Costas, Celina; Méndez, Raúl CSIC; Casacuberta, Josep M. CSIC ORCID; Bastolla, Ugo CSIC ORCID; Gutiérrez Armenta, Crisantoartículo
openAccessGutierrezC_DifferencesinFiring(2019).pdf.jpg6-May-2019Differences in firing efficiency, chromatin, and transcription underlie the developmental plasticity of the Arabidopsis DNA replication originsSequeira-Mendes, Joana CSIC ORCID; Vergara, Zaida ORCID; Peiró, Ramón; Morata, Jordi; Aragüez, Irene; Costas, Celina; Mendez-Giraldez, Raúl; Casacuberta, Josep M. CSIC ORCID; Bastolla, Ugo CSIC ORCID; Gutiérrez, Crisantoartículo
closedAccessaccesoRestringido.pdf.jpg2008Effective connectivity profile: A structural representation that evidences the relationship between protein structures and sequencesBastolla, Ugo CSIC ORCID; Ortiz, Ángel R. CSIC; Porto, Markus; Teichert, Florianartículo
closedAccessaccesoRestringido.pdf.jpg2014Emergence of structure through protein¿protein interactions and pH changes in dually predicted coiled-coil and disordered regions of centrosomal proteins.Treviño, Miguel A. CSIC ORCID; García-Mayoral, M.F. CSIC; Jiménez, M. Angeles CSIC ORCID ; Bastolla, Ugo CSIC ORCID; Bruix, M. CSIC ORCIDartículo
openAccess1471-2105-11-251.pdf.jpg14-May-2010High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTHTeichert, Florian; Minning, Jonas; Bastolla, Ugo CSIC ORCID; Porto, Markusartículo
closedAccessaccesoRestringido.pdf.jpg2013High-resolution analysis of DNA synthesis start sites and nucleosome architecture at efficient mammalian replication originsLombraña, Rodrigo; Almeida, Ricardo; Revuelta, Isabel; Madeira, Sofía CSIC; Herranz, Gonzalo; Saiz, Néstor; Bastolla, Ugo CSIC ORCID; Gómez, María CSIC ORCIDartículo
openAccessPaper_Coronavirus.pdf.jpg1-Apr-2020How lethal is the novel coronavirus, and how many undetected cases there are? The importance of being testedBastolla, Ugo CSIC ORCIDartículo
closedAccess24-Nov-2009In Memoriam of Angel R. Ortiz (1966-2008)Abia, David CSIC ORCID ; Bastolla, Ugo CSIC ORCID; Chacón, Pablo CSIC ORCID; Fábrega Clavería, Carme; Gago, Federico CSIC ORCID; Morreale, Antonio; Tramontano, Annaartículo
openAccessBastollaU_InfluenceOfMutation.pdf.jpg5-Oct-2018Influence of mutation bias and hydrophobicity on the substitution rates and sequence entropies of protein evolutionJiménez-Santos, María José CSIC ORCID ; Arenas, Miguel ORCID; Bastolla, Ugo CSIC ORCIDartículo
closedAccessaccesoRestringido.pdf.jpg2008Local interactions in protein folding determined through an inverse folding modelBastolla, Ugo CSIC ORCID; Porto, Markus; Ortiz, Ángel R. CSICartículo