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Browsing by Author Bastolla, Ugo

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closedAccessaccesoRestringido.pdf.jpg2010181-196 Quantifying the evolutionary divergence of protein structures: The role of function change and function conservationPascual-García, Alberto ; Abia, David ; Méndez, Raúl ; Nido, Gonzalo S. ; Bastolla, Ugo artículo
closedAccessaccesoRestringido.pdf.jpg2008An efficient conformational sampling method for homology modelingHan, Rongsheng; Leo-Macías, Alejandra ; Zerbino, Daniel; Bastolla, Ugo ; Contreras-Moreira, Bruno  ; Ortiz, Ángel R. artículo
openAccess12866_2014_Article_284.pdf.jpg4-Dec-2014Bacteria dialog with Santa Rosalia: Are aggregations of cosmopolitan bacteria mainly explained by habitat filtering or by ecological interactions?Pascual-García, Alberto ; Tamames, Javier; Bastolla, Ugo artículo
closedAccessaccesoRestringido.pdf.jpg2013Characterizing conformation changes in proteins through the torsional elastic responseDos Santos, Helena G.; Klett, Javier ; Méndez, Raúl ; Bastolla, Ugo artículo
openAccess1471-2148-10-178.pdf.jpg14-Jun-2010Comparison of translation loads for standard and alternative genetic codesSammet, Stefanie Gabriele; Bastolla, Ugo ; Porto, Markusartículo
openAccess APascual-García_PlosProtStruc_10000331.pdf.jpg27-Mar-2009Cross-Over between Discrete and Continuous Protein Structure Space: Insights into Automatic Classification and Networks of Protein StructuresPascual-García, Alberto ; Abia, David ; Ortiz, Ángel R. ; Bastolla, Ugo artículo
closedAccessaccesoRestringido.pdf.jpg2013Detecting selection for negative design in proteins through an improved model of the misfolded stateMinning, Jonas; Porto, Markus; Bastolla, Ugo artículo
openAccessU_Bastolla_Biomolecules.pdf.jpg16-Jul-2014Detecting Selection on Protein Stability through Statistical Mechanical Models of Folding and EvolutionBastolla, Ugo artículo
closedAccessaccesoRestringido.pdf.jpg2008Effective connectivity profile: A structural representation that evidences the relationship between protein structures and sequencesBastolla, Ugo ; Ortiz, Ángel R. ; Porto, Markus; Teichert, Florianartículo
closedAccessaccesoRestringido.pdf.jpg2014Emergence of structure through protein¿protein interactions and pH changes in dually predicted coiled-coil and disordered regions of centrosomal proteins.Treviño, Miguel A.; García-Mayoral, M.F. ; Jiménez, M. Angeles ; Bastolla, Ugo ; Bruix, M. artículo
openAccess1471-2105-11-251.pdf.jpg14-May-2010High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTHTeichert, Florian; Minning, Jonas; Bastolla, Ugo ; Porto, Markusartículo
closedAccessaccesoRestringido.pdf.jpg2013High-resolution analysis of DNA synthesis start sites and nucleosome architecture at efficient mammalian replication originsLombraña, Rodrigo ; Almeida, Ricardo ; Revuelta, Isabel; Madeira, Sofía ; Herranz, Gonzalo; Saiz, Néstor; Bastolla, Ugo ; Gómez, María artículo
closedAccess24-Nov-2009In Memoriam of Angel R. Ortiz (1966-2008)Abia, David ; Bastolla, Ugo ; Chacón, Pablo ; Fábrega Clavería, Carme; Gago, Federico ; Morreale, Antonio ; Tramontano, Annaartículo
openAccessBastollaU_InfluenceOfMutation.pdf.jpg5-Oct-2018Influence of mutation bias and hydrophobicity on the substitution rates and sequence entropies of protein evolutionJiménez-Santos, María José ; Arenas, Miguel ; Bastolla, Ugo artículo
closedAccessaccesoRestringido.pdf.jpg2008Local interactions in protein folding determined through an inverse folding modelBastolla, Ugo ; Porto, Markus; Ortiz, Ángel R. artículo
openAccessBastolla U Maximum Likelihood.pdf.jpg2-Apr-2015Maximum-Likelihood Phylogenetic Inference with Selection on Protein Folding Stability.Arenas, Miguel ; Sánchez-Cobos, Agustin; Bastolla, Ugo artículo
closedAccessaccesoRestringido.pdf.jpg2012Modeling structural and genomic constraints in the evolution of proteinsBastolla, Ugo capítulo de libro
openAccess25-Apr-2017Molecular and Functional Bases of Selection against a Mutation Bias in an RNA VirusHiguera, Ignacio de la ; Ávila Lucas, Ana Isabel de ; Perales, Celia ; Sierra, Macarena; Bastolla, Ugo ; Domingo, Esteban artículo
openAccessMolecular_Higuera.pdf.jpg1-May-2017Molecular and functional bases of selection against a mutation bias in an RNA virusHiguera, Ignacio de la ; Ferrer-Orta, Cristina  ; Ávila, Ana Isabel de; Perales, Celia ; Sierra, Macarena; Singh, Kamalendra; Sarafianos, Stefan G.; Dehouck, Yves; Bastolla, Ugo ; Verdaguer, Núria  ; Domingo, Esteban artículo
openAccessBastolla_PLOSCompBiol_e1000767.pdf.jpg6-May-2010Mutation Bias Favors Protein Folding Stability in the Evolution of Small PopulationsMéndez, Raúl ; Fritsche, Miriam; Porto, Markus; Bastolla, Ugo artículo