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Browsing by Author Acemel, Rafael D.

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RightsPreviewIssue DateTitleAuthor(s)Type
openAccess4Cin_Irastorza_Art_PV.pdf.jpg3-Sep-20184Cin: A computational pipeline for 3D genome modeling and virtual Hi-C analyses from 4C dataIrastorza-Azcárate, Ibai; Acemel, Rafael D.; Tena, Juan J. CSIC ORCID; Maeso, Ignacio; Gómez-Skarmeta, José Luis CSIC ORCID ; Devos, Damien P.artículo
openAccessCommon_Royo_Art_PV.pdf.jpg8-Mar-2018A common copy-number variant within SIRPB1 correlates with human out-of-Africa migration after genetic drift correctionRoyo, José Luis CSIC ORCID; Valls, Joan; Acemel, Rafael D.; Gómez-Marín, Carlos CSIC ORCID; Pascual-Pons, Mariona; Lupiañez, Arantxa; Gómez-Skarmeta, José Luis CSIC ORCID ; Fibla, J.artículo
openAccessAcemelRD.pdf.jpg2016A single three-dimensional chromatin compartment in amphioxus indicates a stepwise evolution of vertebrate Hox bimodal regulationAcemel, Rafael D.; Tena, Juan J. CSIC ORCID; Irastorza-Azcárate, Ibai; Marlétaz, Ferdinand; Gómez-Marín, Carlos CSIC ORCID; Calle-Mustienes, Elisa de la CSIC ORCID; Diaz, Sergio G.; Holland, Peter W. H.; Devos, Damien P.; Maeso, Ignacio; Escrivá, Héctor; Gómez-Skarmeta, José Luis CSIC ORCID artículo
openAccessAmphioxus_Marlétaz_Art_PV.pdf.jpg6-Dec-2018Amphioxus functional genomics and the origins of vertebrate gene regulationMarlétaz, Ferdinand; Firbas, Panos; Maeso, Ignacio; Tena, Juan J. CSIC ORCID; Bogdanovic, Ozren CSIC ORCID; Perry, M.; Wyatt, Christopher D. R.; Calle-Mustienes, Elisa de la CSIC ORCID; Bertrand, Stephanie; Burguera, Demian; Acemel, Rafael D.; Van Heeringen, Simon J.; Naranjo, Silvia CSIC ORCID; Herrera-Úbeda, Carlos; Skvortsova, Ksenia; Jiménez-Gancedo, Sandra; Aldea, Daniel; Marquez, Yamile; Buono, Lorena CSIC ORCID; Kozmikova, Iryna; Permanyer, Jon; Louis, Alexandra; Albuixech-Crespo, Beatriz; Petillon, Yann Le; Leon, Anthony; Subirana, Lucie; Balwierz, Piotr J.; Duckett, Paul Edward; Farahani, Ensieh; Aury, Jean‐Marc; Mangenot, Sophie; Wincker, Patrick; Albalat, Ricard; Benito-Gutiérrez, Èlia; Cañestro, Cristian; Castro, Filipe; D’Aniello, Salvatore; Ferrier, David E. K.; Huang, Shengfeng; Laudet, Vincent; Marais, Gabriel A. B.; Pontarotti, Pierre; Schubert, Michael; Seitz, Hervé; Somorjai, Ildiko; Takahashi, Tokiharu; Mirabeau, Olivier; Xu, Anlong; Yu, Jr-Kai; Carninci, Piero; Martínez-Morales, Juan Ramón CSIC ORCID; Roest Crollius, Hugues; Kozmik, Zbynek; Weirauch, Matthew T.; Garcia-Fernàndez, Jordi; Lister, Ryan; Lenhard, Boris; Holland, Peter W. H.; Escrivá, Héctor; Gómez-Skarmeta, José Luis CSIC ORCID ; Irimia, Manuelartículo
openAccessAncient_Touceda_PV_Art2020.pdf.jpgOct-2020Ancient Genomic Regulatory Blocks Are a Source for Regulatory Gene Deserts in Vertebrates after Whole-Genome DuplicationsTouceda-Suárez, María; Kita, Elizabeth M.; Acemel, Rafael D.; Firbas, Panos; Magri, Marta Silvia; Naranjo, Silvia CSIC ORCID; Tena, Juan J. CSIC ORCID; Gómez-Skarmeta, José Luis CSIC ORCID ; Maeso, Ignacio; Irimia, Manuelartículo
closedAccessaccesoRestringido.pdf.jpg2016Biofilm formation-defective mutants in Pseudomonas putidaLópez-Sánchez, Aroa CSIC; Platero, Ana Isabel CSIC; Díaz-Romero, Alberto; Acemel, Rafael D.; Govantes, Fernando CSIC ORCIDartículo
openAccessCOGEDE-S.pdf.jpg2016Cis-regulatory landscapes in development and evolutionMaeso, Ignacio; Acemel, Rafael D.; Gómez-Skarmeta, José Luis CSIC ORCID artículo
openAccessComputer_Acemel_Art_PV.pdf.jpg2018Computer simulation study of early bacterial biofilm developmentAcemel, Rafael D.; Govantes, Fernando CSIC ORCID; Cuetos, Alejandroartículo
openAccessCTCF_knockout_Franke_PV_Art2021.pdf.jpg13-Sep-2021CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expressionFranke, Martin; Calle-Mustienes, Elisa de la CSIC ORCID; Neto, Ana; Almuedo-Castillo, María; Irastorza-Azcárate, Ibai; Acemel, Rafael D.; Tena, Juan J. CSIC ORCID; Santos-Pereira, José M. CSIC ORCID; Gómez-Skarmeta, José Luis CSIC ORCID artículo
closedAccessaccesoRestringido.pdf.jpg6-Oct-2021CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expressionFranke, Martin; Calle-Mustienes, Elisa de la CSIC ORCID; Neto, Ana; Almuedo-Castillo, María; Irastorza-Azcárate, Ibai; Acemel, Rafael D.; Tena, Juan J. CSIC ORCID; Santos-Pereira, José M. CSIC ORCID; Gómez-Skarmeta, José Luis CSIC ORCID comunicación de congreso
closedAccessaccesoRestringido.pdf.jpg17-May-2021CTCF knockout in zebrafish links chromatin structure and developmental gene regulationFranke, Martin; Calle-Mustienes, Elisa de la CSIC ORCID; Neto, Ana; Acemel, Rafael D.; Tena, Juan J. CSIC ORCID; Santos-Pereira, José M. CSIC ORCID; Gómez-Skarmeta, José Luis CSIC ORCID póster de congreso
openAccessCTCF_Franke_ComCong_2020.pdf.jpg18-Nov-2020CTCF knockout in zebrafish links chromatin structure and developmental gene regulationFranke, Martin; Calle-Mustienes, Elisa de la CSIC ORCID; Neto, Ana; Acemel, Rafael D.; Tena, Juan J. CSIC ORCID; Santos-Pereira, José M. CSIC ORCID; Gómez-Skarmeta, José Luis CSIC ORCID actas de congreso
closedAccessaccesoRestringido.pdf.jpg2013Demixing and nematic behaviour of oblate hard spherocylinders and hard spheres mixtures: Monte Carlo simulation and Parsons-Lee theoryGámez, Francisco CSIC ORCID; Acemel, Rafael D.; Cuetos, Alejandroartículo
closedAccessaccesoRestringido.pdf.jpg13-Sep-2021Developmental dynamics of sea urchin and sea star cis-regulation and the evolution of echinoderm genome organizationMagri, Marta Silvia; Voronov, D.; Foley, S.; Franke, Martin; Cuomo, C.; Gil-Galvez, Alejandro; Acemel, Rafael D.; Paganos, P.; Rancelovic, J.; Firbas, Panos; Hinman, V. F.; Arnone, M. I.; Maeso, Ignacio; Gómez-Skarmeta, José Luis CSIC ORCID comunicación de congreso
closedAccessaccesoRestringido.pdf.jpg16-Jun-2015Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains bordersGómez-Marín, Carlos CSIC ORCID; Tena, Juan J. CSIC ORCID; Acemel, Rafael D.; López-Mayorga, Macarena CSIC; Naranjo, Silvia CSIC ORCID; Calle-Mustienes, Elisa de la CSIC ORCID; Maeso, Ignacio; Beccari, Leonardo CSIC ORCID; Bovolenta, Paola CSIC ORCID; Carvajal, Jaime J. CSIC ORCID; Gómez-Skarmeta, José Luis CSIC ORCID artículo
closedAccessaccesoRestringido.pdf.jpg2017Exploring the role of nuclear organization in zebrafish development with hichip using histone mark antibodiesAcemel, Rafael D.; Santos Pereira, J. M.; Naranjo, Silvia CSIC ORCID; Tena, Juan J. CSIC ORCID; Gómez-Skarmeta, José Luis CSIC ORCID comunicación de congreso
openAccesswith IRX3.pdf.jpg2014Obesity-associated variants within FTO form long-range functional connections with IRX3Smemo, Scott; Tena, Juan J. CSIC ORCID; Gómez-Marín, Carlos CSIC ORCID; Naranjo, Silvia CSIC ORCID; Acemel, Rafael D.; Manzanares, Miguel; Gómez-Skarmeta, José Luis CSIC ORCID ; Nóbrega, Marcelo A.artículo
openAccessPioneer_Santos_Pereira_Art2019.pdf.jpg2019Pioneer and repressive functions of p63 during zebrafish embryonic ectoderm specificationSantos-Pereira, José M. CSIC ORCID; Gallardo-Fuentes, Lourdes; Neto, Ana; Acemel, Rafael D.; Tena, Juan J. CSIC ORCIDartículo
openAccess13059_2017_Article_1225.pdf.jpg14-Jun-2017Regulatory landscape fusion in rhabdomyosarcoma through interactions between the PAX3 promoter and FOXO1 regulatory elementsVicente-García, Cristina; Villarejo-Balcells, Bárbara; Irastorza-Azcárate, Ibai; Naranjo, Silvia CSIC ORCID; Acemel, Rafael D.; Tena, Juan J. CSIC ORCID; Rigby, Peter W. J.; Devos, Damien P.; Gómez-Skarmeta, José Luis CSIC ORCID ; Carvajal, Jaime J. CSIC ORCIDartículo
closedAccessaccesoRestringido.pdf.jpg2-May-2019Reprogramming Nuclear Architecture: Just a TADAcemel, Rafael D.; Gómez-Skarmeta, José Luis CSIC ORCID artículo