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openAccessA complete analysis of the epidemiological scenario_PerezLago.pdf.jpg7-Dec-2020A complete analysis of the epidemiological scenario around a SARS-CoV-2 reinfection: previous infection events and subsequent transmissionPérez-Lago, Laura; Pérez Latorre, Leire; Herranz, Marta; Tejerina, Francisco; Sola-Campoy, Pedro J.; Sicilia, Jon; Suárez González, Julia; Andrés Zayas, Cristina; Chiner-Oms, Álvaro CSIC ORCID ; Jiménez Serrano, Santiago; García-González, Neris; Comas, Iñaki CSIC ORCID ; González-Candelas, Fernando; Martínez-Laperche, Carolina; Catalán, Pilar; Muñoz, Patricia; García de Viedma, Daríopreprint
closedAccessaccesoRestringido.pdf.jpg2021A large SARS-CoV-2 outbreak in a long-term care facility: lessons learned from a molecular epidemiological analysisEscalas Bordoy, A.; Vallès, X.; Not, Anna; Chiner-Oms, Álvaro CSIC ORCID ; Torres, J.; Juan-Andres, C.; Pardo-Amil, V.; García, I.; Guitart, G.; Cambra, L.; Saludes, V.; Casañ, C.; Giménez, M.; Blanco, I.; Torres-Puente, Manuela CSIC ORCID ; Cancino-Muñoz, Irving; González-Candelas, Fernando; Comas, Iñaki CSIC ORCID ; Martró, E.póster de congreso
openAccess24-Nov-2021An evolutionary functional genomics approach identifies novel candidate regions involved in isoniazid resistance in Mycobacterium tuberculosisFurió, Victoria; Moreno-Molina, Miguel ; Chiner-Oms, Álvaro CSIC ORCID ; Villamayor, Luis M.; Torres-Puente, Manuela CSIC ORCID ; Comas, Iñaki CSIC ORCID artículo
openAccess2021 mSphere 6-e0059621.pdf.jpg8-Sep-2021Complete Analysis of the Epidemiological Scenario around a SARS-CoV-2 Reinfection: Previous Infection Events and Subsequent TransmissionPérez Lago, Laura; Pérez Latorre, Leire; Herranz, Marta; Tejerina, Francisco; Sola-Campoy, Pedro J.; Sicilia, Jon; Suárez-González, Julia; Andrés-Zayas, Cristina; Chiner-Oms, Álvaro CSIC ORCID ; Jiménez-Serrano, Santiago; García-González, Neris; Comas, Iñaki CSIC ORCID ; González-Candelas, Fernando; Martínez-Laperche, Carolina; Catalán, Pilar; Muñoz, Patricia; García de Viedma, Darío; Gregorio Marañón Microbiology-ID COVID 19 Study Groupartículo
openAccess2019_J Infect Dis_suppl_supplementary_material.pdf.jpg15-Mar-2019Cryptic resistance mutations associated to misdiagnoses of Multidrug-resistant tuberculosisCancino-Muñoz, Irving; Moreno-Molina, Miguel ; Furió, Victoria; Goig, Galo A.; Torres-Puente, Manuela CSIC ORCID ; Chiner-Oms, Álvaro CSIC ORCID ; Villamayor, Luis M.; Sanz, Francisco; Guna-Serrano, María Remedio; Comas, Iñaki CSIC ORCID artículo
openAccessDETECTION OF GENOMIC VARIANTS.pdf.jpg10-Feb-2021Detection Of Genomic Variants Of SARS-CoV-2 Circulating In Wastewater By High-Throughput SequencingPérez Cataluña, Alba; Chiner-Oms, Álvaro CSIC ORCID ; Cuevas Ferrando, Enric; Díaz-Reolid, Azahara; Falcó, Irene; Randazzo, Walter; Girón-Guzmán, Inés; Allende, Ana CSIC ORCID ; Bracho, María Alma; Comas, Iñaki CSIC ORCID ; Sánchez Moragas, Gloria CSIC ORCIDpreprint
openAccess2016 Evolutionary Bioinformatics 12 277.pdf.jpg28-Nov-2016EvalMSA: A Program to Evaluate Multiple Sequence Alignments and Detect OutliersChiner-Oms, Álvaro CSIC ORCID ; González-Candelas, Fernandoartículo
openAccess2021 Comas ECCMID_Evol Virul.pdf.jpg9-Jul-2021Evolution, virulence and immunogenicity of relevant SARS-CoV-2 spike mutantsCoscollá, Mireia; Ruiz-Rodríguez, Paula; Francés-Cuesta, Carlos; Geller, Ron; Chiner-Oms, Álvaro CSIC ORCID ; Jiménez Serrano, Santiago; Marina, Alberto CSIC ORCID ; Martínez-Priego, Llucia CSIC ORCID; D'Auria, Giuseppe; López, Mariana G. ; Cancino-Muñoz, Irving; Torres-Puente, Manuela CSIC ORCID ; Bracho, María Alma; Ruiz-Hueso, Paula; González-Candelas, Fernando; Comas, Iñaki CSIC ORCID póster de congreso
openAccess2021.03.08.21253075.full.pdf.jpg12-Mar-2021Evolutionary and phenotypic characterization of spike mutations in a new SARS-CoV-2 Lineage reveals two Variants of InterestRuiz-Rodríguez, Paula; Francés-Gómez, Clara; Chiner-Oms, Álvaro CSIC ORCID ; López, Mariana G. ; Jiménez Serrano, Santiago; Cancino-Muñoz, Irving; Ruiz-Hueso, Paula; Torres-Puente, Manuela CSIC ORCID ; Bracho, María Alma; D’Auria, Giuseppe; Martínez-Priego, Llucia CSIC ORCID; Guerreiro, Manuel; Montero-Alonso, Marta; Gómez, María Dolores; Piñana, José Luis; Seqcovid-Spain Consortium; González-Candelas, Fernando; Comas, Iñaki CSIC ORCID ; Marina, Alberto CSIC ORCID ; Geller, Ron; Coscollá, Mireiapreprint
openAccess16-Nov-2021Evolutionary and Phenotypic Characterization of Two Spike Mutations in European Lineage 20E of SARS-CoV-2Ruiz-Rodríguez, Paula; Francés-Gómez, Clara; Chiner-Oms, Álvaro CSIC ORCID ; López, Mariana G. ; Jiménez Serrano, Santiago; Cancino-Muñoz, Irving; Ruiz-Hueso, Paula; Torres-Puente, Manuela CSIC ORCID ; Bracho, María Alma; D’Auria, Giuseppe; Martínez-Priego, Llucia CSIC ORCID; Guerreiro, Manuel; Montero-Alonso, Marta; Gómez, María Dolores; Piñana, José Luis; Seqcovid-Spain Consortium; González-Candelas, Fernando; Comas, Iñaki CSIC ORCID ; Marina, Alberto CSIC ORCID; Geller, Ron; Coscollá, Mireiaartículo
openAccess2019 Genome Biol Evol 11-2619.pdf.jpg1-Sep-2019Evolutionary Dissection of the Dot/Icm System Based on Comparative Genomics of 58 Legionella SpeciesGomez-Valero, Laura; Chiner-Oms, Álvaro CSIC ORCID ; Comas, Iñaki CSIC ORCID ; Buchrieser, Carmenartículo
openAccess2019_Tesis_A_Chiner-Oms.pdf.jpg28-Jun-2019Evolutionary systems biology of the Mycobacterium tuberculosis complexChiner-Oms, Álvaro CSIC ORCID tesis doctoral
openAccess2018_Scientific Reports_Article_22237.pdf.jpg28-Feb-2018Gene expression models based on a reference laboratory strain are poor predictors of Mycobacterium tuberculosis complex transcriptional diversityChiner-Oms, Álvaro CSIC ORCID ; González-Candelas, Fernando; Comas, Iñaki CSIC ORCID artículo
openAccess2019 Nat Commun 10-3994.pdf.jpg5-Sep-2019Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complexChiner-Oms, Álvaro CSIC ORCID ; Berney, Michael; Boinett, Christine; González-Candelas, Fernando; Young, Douglas B.; Gagneux, Sebastien; Jacobs Jr, William R.; Parkhill, Julian; Cortes, Teresa; Comas, Iñaki CSIC ORCID artículo
openAccess2021 Comas eccmid_genomic.pdf.jpg9-Jul-2021Genomic determinants associated with SARS-CoV-2 virulenceRuiz-Rodríguez, Paula; Chaturvedi, N.; Bracho, María Alma; Chiner-Oms, Álvaro CSIC ORCID ; Jiménez Serrano, Santiago; López, Mariana G. ; Cancino-Muñoz, Irving; Ruiz-Hueso, Paula; Torres-Puente, Manuela CSIC ORCID ; D’auria, M.; Martínez-Priego, Llucia CSIC ORCID; González-Candelas, Fernando; Comas, Iñaki CSIC ORCID ; Coscollá, Mireiapóster de congreso
openAccess2019 Science Advances 5-eaaw3307.pdf.jpg12-Jun-2019Genomic determinants of speciation and spread of the Mycobacterium tuberculosis complexChiner-Oms, Álvaro CSIC ORCID ; Sánchez-Busó, Leonor; Corander, Jukka; Gagneux, S.; Harris, Simon R.; Young, D.; González-Candelas, Fernando; Comas, Iñaki CSIC ORCID artículo
openAccess2020 Euro Surveill 25-32-2001410.pdf.jpgAug-2020Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020Alm, Erik; Broberg, Eeva K.; Connor, Thomas; Hodcroft, Emma B.; Komissarov, Andrey B.; Maurer-Stroh, Sebastian; Melidou, Angeliki; Neher, Richard A.; O’Toole, Áine; Pereyaslov, Dmitriy; WHO European Region sequencing laboratories; GISAID EpiCoV group; Chiner-Oms, Álvaro CSIC ORCID ; Cancino-Muñoz, Irving; Comas, Iñaki CSIC ORCID ; Goig, Galo A.; Torres-Puente, Manuela CSIC ORCID ; López, Mariana G. ; González-Candelas, Fernandoartículo
openAccess2020 Sci Rep 10-18954.pdf.jpg3-Nov-2020Glucocorticoid-dependent transcription in skin requires epidermal expression of the glucocorticoid receptor and is modulated by the mineralocorticoid receptorSevilla, Lisa M. CSIC ORCID; Bigas, Judit; Chiner-Oms, Álvaro CSIC ORCID ; Comas, Iñaki CSIC ORCID ; Sentandreu, Vicente; Pérez, Paloma CSIC ORCID artículo
openAccess2020 INFORME_SeqCOVID_V1.4_CSIC-IC.pdf.jpg26-Oct-2020INFORME Proyecto COV20/00140 Una perspectiva genómica de la pandemia: lecciones en salud públicaComas, Iñaki CSIC ORCID ; Chiner-Oms, Álvaro CSIC ORCID ; López, Mariana G. ; González-Candelas, Fernandoinforme científico
openAccess2018 Sci Rep 8-15382.pdf.jpg18-Oct-2018Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebaseEzewudo, Matthew; Borens, Amanda; Chiner-Oms, Álvaro CSIC ORCID ; Miotto, Paolo; Chindelevitch, Leonid; Starks, Angela M.; Hanna, Debra; Liwski, Richard; Zignol, Matteo; Gilpin, Christopher; Niemann, Stefan; Kohl, Thomas Andreas; Warren, Robin M.; Crook, Derrick; Gagneux, Sebastien; Hoffner, Sven; Rodrigues, Camilla; Comas, Iñaki CSIC ORCID ; Engelthaler, David M; Alland, David; Rigouts, Leen; Lange, Christoph; Dheda, Keertan; Hasan, Rumina; McNerney, Ruth; Cirillo, Daniela M.; Schito, Marco; Rodwell, Timothy C; Posey, Jamesartículo