GENERAL INFORMATION

1. Title of Dataset: 

CVA of the EDJ based on all molar positions combined

2. Authors: 

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie

3. Date of data collection: N/A


4. Date of data publication on repository: 2023-12-15


5. Geographic location of data collection <latitude, longitude, or city/region, Country, continent as appropriate>: N/A


6. Information about funding sources that supported the collection of the data (including research project reference/acronym): N/A


7. Recommended citation for this dataset: 

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "CVA of the EDJ based on all molar positions combined [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s011

SHARING/ACCESS/CONTEXT INFORMATION

1. Usage Licenses/restrictions placed on the data (please indicate if different data files have different usage license): 

https://creativecommons.org/licenses/by/4.0/

2. Links to publications/other research outputs that cite the data: N/A


3. Links to publications/other research outputs that use the data: 

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie. Geometric morphometrics and paleoproteomics enlighten the paleodiversity of Pongo. https://doi.org/10.1371/journal.pone.0291308. http://hdl.handle.net/10261/348154

4. Links to other publicly accessible locations of the data: N/A


5. Links/relationships to ancillary data sets: 

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "List of specimens used in the present study [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s001

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Cross-validated classification results in frequencies based on M1–M2 [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s002 

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Cross-validated classification results in percentages based on M1–M2 [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s003

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Cross-validated classification results in frequencies based on M3 [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s004

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Cross-validated classification results in percentages based on M3 [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s005

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Summary statistics of paleoproteomic analyses [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s006

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Semilandmark coordinates for each specimen used in this study [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s007 

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "S1 Fig - [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s008

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Maximum likelihood phylogenetic tree [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s009

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Molar type assignments [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s010

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Cross-validated CVA of the EDJ based on all molar positions combined [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s012 

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "S6 Fig - [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s013

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "Palaeoproteomic phylogenetic analysis [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s014

Kubat, Jülide; Paterson Ryan; Patramanis, Ioannis; Barker, Graeme; Demeter, Fabrice; Filoux, Arnaud; Kullmer, Ottmar; Mackie, Meaghan; Marqués-Bonet, Tomàs; Huong, Nguyen Thi Mai; Tuan, Nguyen Anh; Pheng, Sytha; Rippengal, Jessica; Schrenk, Friedemann; Souksavatdy, Viengkeo; Tshen, Lim Tze; Wattanapituksakul, Athiwat; Wang, Wei; Zanolli, Clément; Cappellini, Enrico; Bacon, Anne-Marie; 2023; "S1 Data - [Dataset]"; Figshare; https://doi.org/10.1371/journal.pone.0291308.s015

6. Was data derived from another source? If so, please add link where such work is located: N/A


DATA & FILE OVERVIEW

1. File List: 

pone.0291308.s011.tif = CVA of the EDJ based on all molar positions combined.

2. Relationship between files, if important: N/A


3. Additional related data collected that was not included in the current data package: N/A


4. Are there multiple versions of the dataset? If so, please indicate where they are located: N/A



METHODOLOGICAL INFORMATION

1. Description of methods used for collection/generation of data: N/A


2. Methods for processing the data: N/A


3. Instrument- or software-specific information needed to interpret/reproduce the data, please indicate their location: N/A


4. Standards and calibration information, if appropriate: N/A


5. Environmental/experimental conditions: N/A


6. Describe any quality-assurance procedures performed on the data: N/A


7. People involved with sample collection, processing, analysis and/or submission, please specify using CREDIT roles https://credit.niso.org/: N/A


8. Author contact information: N/A


DATA-SPECIFIC INFORMATION


1. Number of variables: N/A


2. Number of cases/rows: N/A


3. Variable List: N/A


4. Missing data codes: N/A


5. Specialized formats or other abbreviations used: N/A


6. Dictionaries/codebooks used: N/A


7. Controlled vocabularies/ontologies used: N/A