2024-03-29T00:15:51Zhttp://digital.csic.es/dspace-oai/requestoai:digital.csic.es:10261/1654772021-12-28T16:36:58Zcom_10261_79com_10261_1col_10261_332
Dataset for distribution of SIDER2 elements in the Leishmania major genome and transcriptome
Requena, José María
Rastrojo, Alberto
Garde, Esther
López, Manuel C.
Thomas, María del Carmen
Aguado, Begoña
Fundación Ramón Areces
Instituto de Salud Carlos III
Ministerio de Economía y Competitividad (España)
Leishmania
Transcriptomes
SIDER2
Repeated sequences
This paper contains data related to the research article entitled “Genomic cartography and proposal of nomenclature for the repeated, interspersed elements of the Leishmania major SIDER2 family and identification of SIDER2-containing transcripts” [1]. SIDER2 elements are repeated sequences, derived from, nowadays, extinct retrotransposons, that populate the genomes of protist of the genera Leishmania. This dataset (Supplementary file 1), an inventory of 1100 SIDER2 elements, was generated by surveying the L. major complete genome using bioinformatics tools with further manual refinements. In addition to the genomic distribution of these elements (summarized in Fig. 1), this dataset contains information regarding their association with specific transcripts, based on the recently established transcriptome for L. major [2].
Ministerio de Economía y Competitividad (SAF2013-47556-R, co-financed with FEDER funds), and the Fondo de Investigaciones Sanitarias (ISCIII-RETIC RD12/0018/0009-FEDER).An institutional grant from the Fundación Ramón Areces
Peer Reviewed
2018-06-01T07:49:17Z
2018-06-01T07:49:17Z
2017-01-10
2018-06-01T07:49:17Z
artículo
http://purl.org/coar/resource_type/c_6501
doi: 10.1016/j.dib.2017.01.001
issn: 2352-3409
Data in Brief 11: 39- 43 (2017)
http://hdl.handle.net/10261/165477
10.1016/j.dib.2017.01.001
http://dx.doi.org/10.13039/100008054
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/501100004587
28127581
Publisher's version
Sí
open
Elsevier