2024-03-28T11:01:28Zhttp://digital.csic.es/dspace-oai/requestoai:digital.csic.es:10261/1647342020-12-13T09:21:16Zcom_10261_3284com_10261_1col_10261_3285
Lanza, Val F.
Baquero, Fernando
Cruz, Fernando de la
Coque, Teresa M.
2018-05-11T09:57:35Z
2018-05-11T09:57:35Z
2017
Bioinformatics 33(2): 283-285 (2017)
http://hdl.handle.net/10261/164734
10.1093/bioinformatics/btw601
http://dx.doi.org/10.13039/501100001704
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/100012818
27663497
AcCNET (Accessory genome Constellation Network) is a Perl application that aims to compare accessory genomes of a large number of genomic units, both at qualitative and quantitative levels. Using the proteomes extracted from the analysed genomes, AcCNET creates a bipartite network compatible with standard network analysis platforms. AcCNET allows merging phylogenetic and functional information about the concerned genomes, thus improving the capability of current methods of network analysis. The AcCNET bipartite network opens a new perspective to explore the pangenome of bacterial species, focusing on the accessory genome behind the idiosyncrasy of a particular strain and/or population.
eng
closedAccess
AcCNET (Accessory Genome Constellation Network): comparative genomics software for accessory genome analysis using bipartite networks
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