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closedAccessaccesoRestringido.pdf.jpgdic-2018China's tuberculosis epidemic stems from historical expansion of four strains of Mycobacterium tuberculosisLiu, Qingyun; Ma, Aijing; Wei, Lanhai; Pang, Yu; Wu, Beibei; Luo, Tao; Zhou, Yang; Zheng, Hong-Xiang; Jiang, Qi; Gan, Mingyu; Zuo, Tianyu; Liu, Mei; Yang, Chongguang; Jin, Li; Comas, Iñaki CSIC ORCID ; Gagneux, Sebastien; Zhao, Yanlin; Pepperell, Caitlin S.; Gao, Qianartículo
openAccess2019 Nat Commun 10-3994.pdf.jpg5-sep-2019Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complexChiner-Oms, Álvaro CSIC ORCID ; Berney, Michael; Boinett, Christine; González-Candelas, Fernando CSIC ORCID; Young, Douglas B.; Gagneux, Sebastien; Jacobs Jr, William R.; Parkhill, Julian; Cortés, Teresa CSIC ORCID ; Comas, Iñaki CSIC ORCID artículo
openAccess2021 Nature Commun 12-2716.pdf.jpg11-may-2021Genomic analyses of Mycobacterium tuberculosis from human lung resections reveal a high frequency of polyclonal infectionsMoreno-Molina, Miguel CSIC ORCID ; Shubladze, Natalia; Khurtsilava, Iza; Avaliani, Zaza; Bablishvili, Nino; Torres-Puente, Manuela CSIC ORCID ; Villamayor, Luis; Gabrielian, Andrei; Rosenthal, Alex; Vilaplana, Cristina; Gagneux, Sebastien; Kempker, Russell R; Vashakidze, Sergo; Comas, Iñaki CSIC ORCID artículo
openAccess2019 Science Advances 5-eaaw3307.pdf.jpg12-jun-2019Genomic determinants of speciation and spread of the Mycobacterium tuberculosis complexChiner-Oms, Álvaro CSIC ORCID ; Sánchez-Busó, Leonor; Corander, Jukka; Gagneux, Sebastien; Harris, Simon R.; Young, D.; González-Candelas, Fernando CSIC ORCID; Comas, Iñaki CSIC ORCID artículo
openAccess2018 Sci Rep 8-15382.pdf.jpg18-oct-2018Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebaseEzewudo, Matthew; Borens, Amanda; Chiner-Oms, Álvaro CSIC ORCID ; Miotto, Paolo; Chindelevitch, Leonid; Starks, Angela M.; Hanna, Debra; Liwski, Richard; Zignol, Matteo; Gilpin, Christopher; Niemann, Stefan; Kohl, Thomas Andreas; Warren, Robin M.; Crook, Derrick; Gagneux, Sebastien; Hoffner, Sven; Rodrigues, Camilla; Comas, Iñaki CSIC ORCID ; Engelthaler, David M; Alland, David; Rigouts, Leen; Lange, Christoph; Dheda, Keertan; Hasan, Rumina; McNerney, Ruth; Cirillo, Daniela M.; Schito, Marco; Rodwell, Timothy C; Posey, Jamesartículo
openAccess2023 Microbial Genomics 9-001011.pdf.jpgmay-2023Lack of methoxy-mycolates characterizes the geographically restricted lineage 7 of Mycobacterium tuberculosis complexHailu, Elena; Cantillon, Daire; Madrazo-Moya, Carlos Francisco CSIC; Rose, Graham; Wheeler, Paul R.; Golby, Paul; Adnew, Bethlehem; Gagneux, Sebastien; Aseffa, Abraham; Gordon, Stephen V.; Comas, Iñaki CSIC ORCID ; Young, Douglas B.; Waddell, Simon J.; Larrouy-Maumus, Gerald; Berg, Stefanartículo
openAccess2021 F1000Research 10-60.pdf.jpg1-feb-2021Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean RimMenardo, Fabrizio; Rutaihwa, Liliana K.; Zwyer, Michaela; Borrell, Sonia; Comas, Iñaki CSIC ORCID ; Costa Conceição, Emilyn; Coscollá, Mireia CSIC ORCID; Cox, Helen; Joloba, Moses; Dou, Horng-Yunn; Feldmann, Julia; Fenner, Lukas; Fyfe, Janet; Gao, Qian; García de Viedma, Darío CSIC ORCID; Garcia-Basteiro, Alberto L.; Gygli, Sebastian M.; Hella, Jerry; Hiza, Hellen; Jugheli, Levan; Kamwela, Lujeko; Kato-Maeda, Midori; Liu, Qingyun; Ley, Serej D.; Loiseau, Chloé; Mahasirimongkol, Surakameth; Malla, Bijaya; Palittapongarnpim, Prasit; Rakotosamimanana, Niaina; Rasolofo, Voahangy; Reinhard, Miriam; Reither, Klaus; Sasamalo, Mohamed; Silva Duarte, Rafael; Sola, Christophe; Suffys, Philip; Batista Lima, Karla Valeria; Yeboah-Manu, Dorothy; Beisel, Christian; Brites, Daniela; Gagneux, Sebastienartículo
openAccessmoleculaGhana.pdf.jpg2019Molecular epidemiology and whole genome sequencing analysis of clinical Mycobacterium bovis from GhanaDarko Otchere, Isaac; Tonder, Andries J. van; Asante-Poku, Adwoa; Sánchez-Busó, Leonor; Coscollá, Mireia CSIC ORCID; Osei-Wusu, Stephen; Asare, Prince; Yaw Aboagye, Samuel; Acquah Ekuban, Samuel; Iddrisu Yahayah, Abdallah; Forson, Audrey; Baddoo, Akosua; Laryea, Clement; Parkhill, Julian; Harris, Simon R.; Gagneux, Sebastien; Yeboah-Manu, Dorothyartículo
openAccess2020 Nat Commun 11-1949.pdf.jpg23-abr-2020Mycobacterium tuberculosis associated with severe tuberculosis evades cytosolic surveillance systems and modulates IL-1β productionSousa, Jeremy; Cá, Baltazar; Maceiras, Ana Raquel; Simoes-Costa, Luisa; Fonseca, Kaori L.; Fernandes, Ana Isabel; Ramos, Angélica; Carvalho, Teresa; Barros, Leandro; Magalhães, Carlos; Chiner-Oms, Álvaro CSIC ORCID ; Machado, Henrique; Veiga, Maria Isabel; Singh, Albel; Pereira, Rui; Amorim, António; Vieira, Jorge; Vieira, Cristina P.; Bhatt, Apoorva; Rodrigues, Fernando; Rodrigues, Pedro N. S.; Gagneux, Sebastien; Gil Castro, António; Guimarães, João Tiago; Bastos, Helder Novais; Osório, Nuno S.; Comas, Iñaki CSIC ORCID ; Saraiva, Margaridaartículo
openAccessphylogehistor.pdf.jpg2021Phylogenomics of Mycobacterium africanum reveals a new lineage and a complex evolutionary historyCoscollá, Mireia CSIC ORCID; Gagneux, Sebastien; Menardo, Fabrizio; Loiseau, Chloé; Ruiz-Rodríguez, Paula CSIC ORCID ; Borrell, Sonia; Darko Otchere, Isaac; Asante-Poku, Adwoa; Asare, Prince; Sánchez-Busó, Leonor; Fyfe, Janet A.; Parkhill, Julian; Beisel, Christian; Yeboah-Manu, Dorothy; Brites, Danielaartículo
openAccess2014 Tuberculosis 94-346.pdf.jpgmay-2014PolyTB: a genomic variation map for Mycobacterium tuberculosisColl, Francesc ; Preston, Mark; Guerra-Assunção, José Afonso; Hill-Cawthorn, Grant; Harris, David; Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Drobniewski, Francis; Gagneux, Sebastien; Glynn, Judith R.; Pain, Arnab; Parkhill, Julian; McNerney, Ruth; Martin, Nigel; Clark, Taane G.artículo
openAccessquantituber.pdf.jpg2021Quantifying transmission fitness costs of multi-drug resistant tuberculosisPečerska, Jūlija; Kühnert, Denise; Meehan, Conor J.; Coscollá, Mireia CSIC ORCID; Jong, Bouke C. de; Gagneux, Sebastien; Stadler, Tanjaartículo
openAccess2021 Front Microbiol 12-633396.pdf.jpg20-ago-2021The Sputum Microbiome in Pulmonary Tuberculosis and Its Association With Disease Manifestations: A Cross-Sectional StudyTiclla, Monica R.; Hella, Jerry; Hiza, Hellen; Sasamalo, Mohamed; Mhimbira, Francis; Rutaihwa, Liliana K.; Droz, Sara; Schaller, Sarah; Reither, Klaus; Hilty, Markus; Comas, Iñaki CSIC ORCID ; Beisel, Christian; Schmid, Christoph D.; Fenner, Lukas; Gagneux, Sebastienartículo
openAccess2018 Front Immunol 8-01948.pdf.jpg9-ene-2018The Troika Host-Pathogen-Extrinsic Factors in Tuberculosis: Modulating Inflammation and Clinical OutcomesNovais Bastos, Helder; Osório, Nuno S.; Gagneux, Sebastien; Comas, Iñaki CSIC ORCID ; Saraiva, Margaridaartículo
openAccess2019 Nat Rev Microbiol 17-533_vers_aut.pdf.jpgsep-2019Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issuesMeehan, Conor J.; Goig, Galo A. CSIC ORCID; Kohl, Thomas A.; Verboven, Lennert; Dippenaar, Anzaan; Ezewudo, Matthew; Farhat, Maha R.; Guthrie, Jennifer L.; Laukens, Kris; Miotto, Paolo; Ofori-Anyinam, Boatema; Dreyer, Viola; Supply, Philip; Suresh, Anita; Utpatel, Christian; van Soolingen, Dick; Zhou, Yang; Ashton, Philip M.; Brites, Daniela; Cabibbe, Andrea M.; de Jong, Bouke C.; de Vos, Margaretha; Menardo, Fabrizio; Gagneux, Sebastien; Gao, Qian; Heupink, Tim H.; Liu, Qingyun; Loiseau, Chloé; Rigouts, Leen; Rodwell, Timothy C.; Tagliani, Elisa; Walker, Timothy M.; Warren, Robin M.; Zhao, Yanlin; Zignol, Matteo; Schito, Marco; Gardy, Jennifer; Cirillo, Daniela M.; Niemann, Stefan; Comas, Iñaki CSIC ORCID ; Van Rie, Anneliesrevisión