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Browsing by Author Bastolla, Ugo

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Showing results 3 to 22 of 28
Issue DateTitleAuthor(s)Type
2013Characterizing conformation changes in proteins through the torsional elastic responseDos Santos, Helena G.; Klett, Javier; Méndez, Raúl; Bastolla, UgoArtículo
14-Jun-2010Comparison of translation loads for standard and alternative genetic codesSammet, Stefanie Gabriele; Bastolla, Ugo; Porto, MarkusArtículo
27-Mar-2009Cross-Over between Discrete and Continuous Protein Structure Space: Insights into Automatic Classification and Networks of Protein StructuresPascual-García, Alberto; Abia, David; Ortíz, Ángel R.; Bastolla, UgoArtículo
2013Detecting selection for negative design in proteins through an improved model of the misfolded stateMinning, Jonas; Porto, Markus; Bastolla, UgoArtículo
16-Jul-2014Detecting Selection on Protein Stability through Statistical Mechanical Models of Folding and EvolutionBastolla, UgoArtículo
2008Effective connectivity profile: A structural representation that evidences the relationship between protein structures and sequencesBastolla, Ugo; Ortíz, Ángel R.; Porto, Markus; Teichert, FlorianArtículo
14-May-2010High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTHTeichert, Florian; Minning, Jonas; Bastolla, Ugo; Porto, MarkusArtículo
2013High-resolution analysis of DNA synthesis start sites and nucleosome architecture at efficient mammalian replication originsLombraña, Rodrigo; Almeida, Ricardo; Revuelta, Isabel; Madeira, Sofía; Herranz, Gonzalo; Saiz, Néstor; Bastolla, Ugo; Gómez, MaríaArtículo
24-Nov-2009In Memoriam of Angel R. Ortiz (1966-2008)Abia, David; Bastolla, Ugo; Chacón, Pablo; Fábrega Clavería, Carme; Gago, Federico; Morreale, Antonio; Tramontano, AnnaArtículo
2008Local interactions in protein folding determined through an inverse folding modelBastolla, Ugo; Porto, Markus; Ortíz, Angel R.Artículo
2012Modeling structural and genomic constraints in the evolution of proteinsBastolla, UgoCapítulo de libro
6-May-2010Mutation Bias Favors Protein Folding Stability in the Evolution of Small PopulationsMéndez, Raúl; Fritsche, Miriam; Porto, Markus; Bastolla, UgoArtículo
11-Nov-2011Protein disorder in the centrosome correlates with complexity in cell types numberNido, G. S.; Méndez, Raúl; Pascual-García, Alberto; Abia, David; Bastolla, UgoArtículo
2013Protein evolution along phylogenetic histories under structurally constrained substitution modelsArenas, Miguel; Dos Santos, Helena G.; Posadas, Pavid; Bastolla, UgoArtículo
2005Protein evolution in viral quasispecies under selective pressure: A thermodynamic and phylogenetic analysisBriones, Carlos; Bastolla, UgoArtículo
31-May-2006A protein evolution model with independent sites that reproduces site-specific amino acid distributions from the Protein Data BankBastolla, Ugo; Porto, Markus; Román, Eduardo H.; Vendruscolo, MicheleArtículo
2010Quantifying the evolutionary divergence of protein structures: The role of function change and function conservationPascual-García, Alberto; Abia, David; Méndez, Raúl; Nido, G. S.; Bastolla, UgoArtículo
Jan-2003Reductive genome evolution in Buchnera aphidicolaHam, Roeland C.H.J. van; Kamerbeek, Judith; Palacios, Carmen; Rausell, Carolina; Abascal, Federico; Bastolla, Ugo; Fernández, José M.; Jiménez, Luis; Postigo, Marina; Silva-Moreno, Francisco; Tamames, Javier; Viguera, Enrique; Latorre-Castillo, Amparo; Valencia, Alfonso; Morán, Federico; Moya-Simarro, AndrésArtículo
31-Oct-2007SABERTOOTH: protein structural alignment based on a vectorial structure representationTeichert, Florian; Bastolla, Ugo; Porto, MarkusArtículo
2012Sequence determinants of protein folding rates: Positive correlation between contact energy and contact range indicates selection for fast foldingBastolla, Ugo; Brucolini, Pier Paolo; Velasco, José LuisArtículo

Showing results 3 to 22 of 28